RNA–Protein interactions for RNA: ENST00000567432.1

GINS3-208, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-208ENST00000567432 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
GINS3-208ENST00000567432 CHIC1Q5VXU3 224 aa11.64□□□□□ -0.55
GINS3-208ENST00000567432 PHF23Q9BUL5 403 aaPredicted RBP10.24□□□□□ -0.77
GINS3-208ENST00000567432 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
GINS3-208ENST00000567432 PLPPR3Q6T4P5 718 aa9.51□□□□□ -0.89
GINS3-208ENST00000567432 FOXD1Q16676 465 aa9.27□□□□□ -0.93
GINS3-208ENST00000567432 ADRA2BP18089 450 aa9□□□□□ -0.97
GINS3-208ENST00000567432 PPP6R1Q9UPN7 881 aa9□□□□□ -0.97
GINS3-208ENST00000567432 PIAS4Q8N2W9 510 aaPredicted RBP8.76□□□□□ -1.01
GINS3-208ENST00000567432 MSH5O43196 834 aa8.51□□□□□ -1.05
GINS3-208ENST00000567432 PPP4R3CPQ6ZMV5 832 aa8.39□□□□□ -1.07
GINS3-208ENST00000567432 KCNA4P22459 653 aa8.32□□□□□ -1.08
GINS3-208ENST00000567432 SCAF1Q9H7N4 1312 aaKnown RBP8.26□□□□□ -1.09
GINS3-208ENST00000567432 NCBP3Q53F19 620 aaKnown RBP8.21□□□□□ -1.1
GINS3-208ENST00000567432 MAPK8IP2Q13387 824 aaPredicted RBP8.13□□□□□ -1.11
GINS3-208ENST00000567432 CNKSR2Q8WXI2 1034 aa8.13□□□□□ -1.11
GINS3-208ENST00000567432 NPM3O75607 178 aaKnown RBP8.08□□□□□ -1.12
GINS3-208ENST00000567432 DMRT2Q9Y5R5 561 aa8□□□□□ -1.13
GINS3-208ENST00000567432 POTEDQ86YR6 584 aa7.95□□□□□ -1.14
GINS3-208ENST00000567432 SLC4A1APQ9BWU0 796 aaKnown RBP7.95□□□□□ -1.14
GINS3-208ENST00000567432 RNF216Q9NWF9 866 aaPredicted RBP7.94□□□□□ -1.14
GINS3-208ENST00000567432 HOXD11P31277 338 aaPredicted RBP7.88□□□□□ -1.15
GINS3-208ENST00000567432 EHMT2Q96KQ7 1210 aa7.84□□□□□ -1.15
GINS3-208ENST00000567432 DNAJC5BQ9UF47 199 aa7.84□□□□□ -1.15
GINS3-208ENST00000567432 CSRNP3Q8WYN3 585 aa7.7□□□□□ -1.18
GINS3-208ENST00000567432 DCAF8L1A6NGE4 600 aa7.65□□□□□ -1.18
GINS3-208ENST00000567432 ZBTB22O15209 634 aa7.65□□□□□ -1.18
GINS3-208ENST00000567432 FOXD4L1Q9NU39 408 aa7.62□□□□□ -1.19
GINS3-208ENST00000567432 SLC4A2P04920 1241 aa7.6□□□□□ -1.19
GINS3-208ENST00000567432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.52□□□□□ -1.21
GINS3-208ENST00000567432 MYCNP04198 464 aaPredicted RBP7.46□□□□□ -1.22
GINS3-208ENST00000567432 U3KPZ7 1027 aaPredicted RBP7.39□□□□□ -1.23
GINS3-208ENST00000567432 ATXN8OSP0DMR3 200 aa7.36□□□□□ -1.23
GINS3-208ENST00000567432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.35□□□□□ -1.23
GINS3-208ENST00000567432 HNRNPUL2Q1KMD3 747 aaKnown RBP7.35□□□□□ -1.23
GINS3-208ENST00000567432 SAMD1Q6SPF0 538 aaPredicted RBP7.34□□□□□ -1.23
GINS3-208ENST00000567432 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
GINS3-208ENST00000567432 APLP2Q06481 763 aa7.26□□□□□ -1.25
GINS3-208ENST00000567432 ATF5Q9Y2D1 282 aaPredicted RBP7.25□□□□□ -1.25
GINS3-208ENST00000567432 C1QBPQ07021 282 aaKnown RBP7.22□□□□□ -1.25
GINS3-208ENST00000567432 SPINK5Q9NQ38 1064 aaPredicted RBP7.15□□□□□ -1.26
GINS3-208ENST00000567432 ZNF219Q9P2Y4 722 aaPredicted RBP7.14□□□□□ -1.27
GINS3-208ENST00000567432 CAPN15O75808 1086 aa7.13□□□□□ -1.27
GINS3-208ENST00000567432 TRHP20396 242 aaPredicted RBP7.11□□□□□ -1.27
GINS3-208ENST00000567432 CACNB1Q02641 598 aaPredicted RBP7.03□□□□□ -1.28
GINS3-208ENST00000567432 POLA2Q14181 598 aa7.03□□□□□ -1.28
GINS3-208ENST00000567432 ABCB7O75027 752 aa7□□□□□ -1.29
GINS3-208ENST00000567432 DSG3P32926 999 aa6.98□□□□□ -1.29
GINS3-208ENST00000567432 FBLN2P98095 1184 aa6.96□□□□□ -1.3
GINS3-208ENST00000567432 FKBP8Q14318 412 aa6.96□□□□□ -1.3
GINS3-208ENST00000567432 MKRN4PQ13434 485 aaPredicted RBP6.94□□□□□ -1.3
GINS3-208ENST00000567432 ZBTB12Q9Y330 459 aaPredicted RBP6.94□□□□□ -1.3
GINS3-208ENST00000567432 SPDYE4A6NLX3 237 aa6.85□□□□□ -1.31
GINS3-208ENST00000567432 OSCARQ8IYS5 282 aa6.78□□□□□ -1.32
GINS3-208ENST00000567432 PROM2Q8N271 834 aa6.76□□□□□ -1.33
GINS3-208ENST00000567432 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
GINS3-208ENST00000567432 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
GINS3-208ENST00000567432 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
GINS3-208ENST00000567432 ZNF692Q9BU19 519 aaPredicted RBP6.75□□□□□ -1.33
GINS3-208ENST00000567432 SSUH2Q9Y2M2 353 aa6.71□□□□□ -1.34
GINS3-208ENST00000567432 FBXO3Q9UK99 471 aa6.7□□□□□ -1.34
GINS3-208ENST00000567432 PABPN1Q86U42 306 aaKnown RBP eCLIP6.65□□□□□ -1.34
GINS3-208ENST00000567432 RBM42Q9BTD8 480 aaKnown RBP6.65□□□□□ -1.34
GINS3-208ENST00000567432 AKT1S1Q96B36 256 aa6.6□□□□□ -1.35
GINS3-208ENST00000567432 VASPP50552 380 aaPredicted RBP6.59□□□□□ -1.35
GINS3-208ENST00000567432 STAG3Q9UJ98 1225 aa6.58□□□□□ -1.36
GINS3-208ENST00000567432 AMER1Q5JTC6 1135 aaPredicted RBP6.55□□□□□ -1.36
GINS3-208ENST00000567432 REM2Q8IYK8 340 aaPredicted RBP6.53□□□□□ -1.36
GINS3-208ENST00000567432 SPDYE1Q8NFV5 336 aaPredicted RBP6.52□□□□□ -1.37
GINS3-208ENST00000567432 RTN4Q9NQC3 1192 aaKnown RBP6.52□□□□□ -1.37
GINS3-208ENST00000567432 IFNLR1Q8IU57 520 aaPredicted RBP6.51□□□□□ -1.37
GINS3-208ENST00000567432 MIER1Q8N108 512 aa6.49□□□□□ -1.37
GINS3-208ENST00000567432 PLCD3Q8N3E9 789 aa6.49□□□□□ -1.37
GINS3-208ENST00000567432 CLEC11AQ9Y240 323 aa6.48□□□□□ -1.37
GINS3-208ENST00000567432 PLEKHG5O94827 1062 aa6.46□□□□□ -1.38
GINS3-208ENST00000567432 KLHL34Q8N239 644 aa6.46□□□□□ -1.38
GINS3-208ENST00000567432 PITPNM1O00562 1244 aa6.45□□□□□ -1.38
GINS3-208ENST00000567432 PRR29P0C7W0 189 aa6.45□□□□□ -1.38
GINS3-208ENST00000567432 SPOCK2Q92563 424 aa6.42□□□□□ -1.38
GINS3-208ENST00000567432 ZBTB47Q9UFB7 747 aaPredicted RBP6.42□□□□□ -1.38
GINS3-208ENST00000567432 CREBZFQ9NS37 354 aa6.39□□□□□ -1.39
GINS3-208ENST00000567432 MNX1P50219 401 aaPredicted RBP6.33□□□□□ -1.4
GINS3-208ENST00000567432 PKD2Q13563 968 aa6.33□□□□□ -1.4
GINS3-208ENST00000567432 CHRDL2Q6WN34 429 aa6.33□□□□□ -1.4
GINS3-208ENST00000567432 FXR2P51116 673 aaKnown RBP eCLIP6.31□□□□□ -1.4
GINS3-208ENST00000567432 NUBP1P53384 320 aa6.31□□□□□ -1.4
GINS3-208ENST00000567432 CHADLQ6NUI6 762 aa6.31□□□□□ -1.4
GINS3-208ENST00000567432 NPM1P06748 294 aaKnown RBP eCLIP6.3□□□□□ -1.4
GINS3-208ENST00000567432 CIZ1Q9ULV3 898 aaPredicted RBP6.3□□□□□ -1.4
GINS3-208ENST00000567432 PRKAR2AP13861 404 aaKnown RBP6.29□□□□□ -1.4
GINS3-208ENST00000567432 ECM2O94769 699 aaPredicted RBP6.28□□□□□ -1.4
GINS3-208ENST00000567432 GSE1Q14687 1217 aa6.27□□□□□ -1.41
GINS3-208ENST00000567432 PIP4P2Q8N4L2 257 aa6.27□□□□□ -1.41
GINS3-208ENST00000567432 FARP1Q9Y4F1 1045 aaPredicted RBP6.27□□□□□ -1.41
GINS3-208ENST00000567432 FAM212AQ96EL1 285 aa6.26□□□□□ -1.41
GINS3-208ENST00000567432 DCAF8Q5TAQ9 597 aa6.25□□□□□ -1.41
GINS3-208ENST00000567432 RASEFQ8IZ41 740 aa6.25□□□□□ -1.41
GINS3-208ENST00000567432 TRIM41Q8WV44 630 aa6.25□□□□□ -1.41
GINS3-208ENST00000567432 DCAF8L2P0C7V8 631 aa6.23□□□□□ -1.41
GINS3-208ENST00000567432 RGL2O15211 777 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms