RNA–Protein interactions for RNA: ENST00000566887.1

TMX3-209, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 3

Gene TMX3, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-209ENST00000566887 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
TMX3-209ENST00000566887 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
TMX3-209ENST00000566887 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
TMX3-209ENST00000566887 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
TMX3-209ENST00000566887 FOXD1Q16676 465 aa23.33■■□□□ 1.33
TMX3-209ENST00000566887 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
TMX3-209ENST00000566887 ADRA2BP18089 450 aa22.18■■□□□ 1.14
TMX3-209ENST00000566887 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
TMX3-209ENST00000566887 PIAS4Q8N2W9 510 aaPredicted RBP21.99■■□□□ 1.11
TMX3-209ENST00000566887 MSH5O43196 834 aa21.71■■□□□ 1.07
TMX3-209ENST00000566887 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
TMX3-209ENST00000566887 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
TMX3-209ENST00000566887 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
TMX3-209ENST00000566887 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
TMX3-209ENST00000566887 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
TMX3-209ENST00000566887 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
TMX3-209ENST00000566887 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
TMX3-209ENST00000566887 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
TMX3-209ENST00000566887 KCNA4P22459 653 aa19.42■□□□□ 0.7
TMX3-209ENST00000566887 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
TMX3-209ENST00000566887 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
TMX3-209ENST00000566887 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
TMX3-209ENST00000566887 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
TMX3-209ENST00000566887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
TMX3-209ENST00000566887 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
TMX3-209ENST00000566887 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
TMX3-209ENST00000566887 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
TMX3-209ENST00000566887 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
TMX3-209ENST00000566887 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
TMX3-209ENST00000566887 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
TMX3-209ENST00000566887 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
TMX3-209ENST00000566887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
TMX3-209ENST00000566887 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
TMX3-209ENST00000566887 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
TMX3-209ENST00000566887 APLP2Q06481 763 aa17.86■□□□□ 0.45
TMX3-209ENST00000566887 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
TMX3-209ENST00000566887 CAPN15O75808 1086 aa17.83■□□□□ 0.44
TMX3-209ENST00000566887 ZBTB22O15209 634 aa17.81■□□□□ 0.44
TMX3-209ENST00000566887 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
TMX3-209ENST00000566887 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
TMX3-209ENST00000566887 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
TMX3-209ENST00000566887 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
TMX3-209ENST00000566887 DSG3P32926 999 aa17.52■□□□□ 0.4
TMX3-209ENST00000566887 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
TMX3-209ENST00000566887 ABCB7O75027 752 aa17.43■□□□□ 0.38
TMX3-209ENST00000566887 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
TMX3-209ENST00000566887 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
TMX3-209ENST00000566887 POLA2Q14181 598 aa17.26■□□□□ 0.35
TMX3-209ENST00000566887 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
TMX3-209ENST00000566887 FBLN2P98095 1184 aa16.81■□□□□ 0.28
TMX3-209ENST00000566887 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
TMX3-209ENST00000566887 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
TMX3-209ENST00000566887 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
TMX3-209ENST00000566887 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
TMX3-209ENST00000566887 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
TMX3-209ENST00000566887 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
TMX3-209ENST00000566887 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
TMX3-209ENST00000566887 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
TMX3-209ENST00000566887 REM2Q8IYK8 340 aaPredicted RBP16.29■□□□□ 0.2
TMX3-209ENST00000566887 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
TMX3-209ENST00000566887 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
TMX3-209ENST00000566887 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
TMX3-209ENST00000566887 POTEHQ6S545 545 aa16.15■□□□□ 0.18
TMX3-209ENST00000566887 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMX3-209ENST00000566887 PITPNM1O00562 1244 aa16.11■□□□□ 0.17
TMX3-209ENST00000566887 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
TMX3-209ENST00000566887 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
TMX3-209ENST00000566887 FKBP8Q14318 412 aa15.89■□□□□ 0.13
TMX3-209ENST00000566887 PIP4P2Q8N4L2 257 aa15.88■□□□□ 0.13
TMX3-209ENST00000566887 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
TMX3-209ENST00000566887 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
TMX3-209ENST00000566887 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
TMX3-209ENST00000566887 PROM2Q8N271 834 aa15.74■□□□□ 0.11
TMX3-209ENST00000566887 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
TMX3-209ENST00000566887 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
TMX3-209ENST00000566887 HAX1O00165 279 aa15.52■□□□□ 0.08
TMX3-209ENST00000566887 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
TMX3-209ENST00000566887 FARP1Q9Y4F1 1045 aaPredicted RBP15.47■□□□□ 0.07
TMX3-209ENST00000566887 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
TMX3-209ENST00000566887 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
TMX3-209ENST00000566887 MIER1Q8N108 512 aa15.4■□□□□ 0.06
TMX3-209ENST00000566887 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
TMX3-209ENST00000566887 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
TMX3-209ENST00000566887 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
TMX3-209ENST00000566887 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
TMX3-209ENST00000566887 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
TMX3-209ENST00000566887 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
TMX3-209ENST00000566887 EVX2Q03828 476 aa15.25■□□□□ 0.03
TMX3-209ENST00000566887 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
TMX3-209ENST00000566887 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
TMX3-209ENST00000566887 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
TMX3-209ENST00000566887 ZRANB1Q9UGI0 708 aa15.15■□□□□ 0.02
TMX3-209ENST00000566887 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
TMX3-209ENST00000566887 TSPYL2Q9H2G4 693 aaPredicted RBP15.06■□□□□ 0
TMX3-209ENST00000566887 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
TMX3-209ENST00000566887 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
TMX3-209ENST00000566887 GABBR2O75899 941 aa14.98□□□□□ -0.01
TMX3-209ENST00000566887 NUBP1P53384 320 aa14.96□□□□□ -0.01
TMX3-209ENST00000566887 CLCN6P51797 869 aa14.95□□□□□ -0.02
TMX3-209ENST00000566887 PHF12Q96QT6 1004 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms