RNA–Protein interactions for RNA: ENST00000566679.6

CYLD-211, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 5

Gene CYLD, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-211ENST00000566679 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
CYLD-211ENST00000566679 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
CYLD-211ENST00000566679 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
CYLD-211ENST00000566679 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
CYLD-211ENST00000566679 FOXD1Q16676 465 aa20.96■□□□□ 0.95
CYLD-211ENST00000566679 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
CYLD-211ENST00000566679 ADRA2BP18089 450 aa20■□□□□ 0.79
CYLD-211ENST00000566679 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
CYLD-211ENST00000566679 PIAS4Q8N2W9 510 aaPredicted RBP19.81■□□□□ 0.76
CYLD-211ENST00000566679 MSH5O43196 834 aa19.51■□□□□ 0.71
CYLD-211ENST00000566679 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
CYLD-211ENST00000566679 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
CYLD-211ENST00000566679 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
CYLD-211ENST00000566679 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
CYLD-211ENST00000566679 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
CYLD-211ENST00000566679 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
CYLD-211ENST00000566679 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
CYLD-211ENST00000566679 KCNA4P22459 653 aa17.71■□□□□ 0.43
CYLD-211ENST00000566679 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
CYLD-211ENST00000566679 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
CYLD-211ENST00000566679 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
CYLD-211ENST00000566679 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
CYLD-211ENST00000566679 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
CYLD-211ENST00000566679 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
CYLD-211ENST00000566679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
CYLD-211ENST00000566679 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
CYLD-211ENST00000566679 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
CYLD-211ENST00000566679 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
CYLD-211ENST00000566679 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
CYLD-211ENST00000566679 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
CYLD-211ENST00000566679 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
CYLD-211ENST00000566679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
CYLD-211ENST00000566679 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
CYLD-211ENST00000566679 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
CYLD-211ENST00000566679 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
CYLD-211ENST00000566679 ZBTB22O15209 634 aa16.21■□□□□ 0.19
CYLD-211ENST00000566679 APLP2Q06481 763 aa16.21■□□□□ 0.19
CYLD-211ENST00000566679 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
CYLD-211ENST00000566679 CAPN15O75808 1086 aa16.1■□□□□ 0.17
CYLD-211ENST00000566679 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
CYLD-211ENST00000566679 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
CYLD-211ENST00000566679 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
CYLD-211ENST00000566679 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
CYLD-211ENST00000566679 ATXN8OSP0DMR3 200 aa15.82■□□□□ 0.12
CYLD-211ENST00000566679 ABCB7O75027 752 aa15.74■□□□□ 0.11
CYLD-211ENST00000566679 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
CYLD-211ENST00000566679 DSG3P32926 999 aa15.73■□□□□ 0.11
CYLD-211ENST00000566679 POLA2Q14181 598 aa15.61■□□□□ 0.09
CYLD-211ENST00000566679 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
CYLD-211ENST00000566679 FBLN2P98095 1184 aa15.29■□□□□ 0.04
CYLD-211ENST00000566679 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
CYLD-211ENST00000566679 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
CYLD-211ENST00000566679 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
CYLD-211ENST00000566679 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
CYLD-211ENST00000566679 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
CYLD-211ENST00000566679 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
CYLD-211ENST00000566679 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
CYLD-211ENST00000566679 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
CYLD-211ENST00000566679 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
CYLD-211ENST00000566679 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
CYLD-211ENST00000566679 POTEHQ6S545 545 aa14.67□□□□□ -0.06
CYLD-211ENST00000566679 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
CYLD-211ENST00000566679 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
CYLD-211ENST00000566679 FKBP8Q14318 412 aa14.61□□□□□ -0.07
CYLD-211ENST00000566679 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
CYLD-211ENST00000566679 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
CYLD-211ENST00000566679 SPDYE1Q8NFV5 336 aaPredicted RBP14.56□□□□□ -0.08
CYLD-211ENST00000566679 CLEC11AQ9Y240 323 aa14.56□□□□□ -0.08
CYLD-211ENST00000566679 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
CYLD-211ENST00000566679 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
CYLD-211ENST00000566679 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
CYLD-211ENST00000566679 PROM2Q8N271 834 aa14.32□□□□□ -0.12
CYLD-211ENST00000566679 PIP4P2Q8N4L2 257 aa14.27□□□□□ -0.13
CYLD-211ENST00000566679 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
CYLD-211ENST00000566679 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
CYLD-211ENST00000566679 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
CYLD-211ENST00000566679 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
CYLD-211ENST00000566679 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
CYLD-211ENST00000566679 MIER1Q8N108 512 aa14.06□□□□□ -0.16
CYLD-211ENST00000566679 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
CYLD-211ENST00000566679 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
CYLD-211ENST00000566679 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
CYLD-211ENST00000566679 HAX1O00165 279 aa13.95□□□□□ -0.18
CYLD-211ENST00000566679 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
CYLD-211ENST00000566679 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
CYLD-211ENST00000566679 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
CYLD-211ENST00000566679 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
CYLD-211ENST00000566679 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
CYLD-211ENST00000566679 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
CYLD-211ENST00000566679 EVX2Q03828 476 aa13.8□□□□□ -0.2
CYLD-211ENST00000566679 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
CYLD-211ENST00000566679 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
CYLD-211ENST00000566679 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
CYLD-211ENST00000566679 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
CYLD-211ENST00000566679 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
CYLD-211ENST00000566679 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
CYLD-211ENST00000566679 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
CYLD-211ENST00000566679 SPOCK2Q92563 424 aa13.62□□□□□ -0.23
CYLD-211ENST00000566679 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
CYLD-211ENST00000566679 NUBP1P53384 320 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms