RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
NAE1-216ENST00000566663 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
NAE1-216ENST00000566663 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
NAE1-216ENST00000566663 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
NAE1-216ENST00000566663 FOXD1Q16676 465 aa21.18■□□□□ 0.98
NAE1-216ENST00000566663 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
NAE1-216ENST00000566663 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
NAE1-216ENST00000566663 ADRA2BP18089 450 aa20.09■□□□□ 0.81
NAE1-216ENST00000566663 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
NAE1-216ENST00000566663 MSH5O43196 834 aa19.67■□□□□ 0.74
NAE1-216ENST00000566663 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
NAE1-216ENST00000566663 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
NAE1-216ENST00000566663 MAPK8IP2Q13387 824 aaPredicted RBP18.32■□□□□ 0.52
NAE1-216ENST00000566663 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
NAE1-216ENST00000566663 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
NAE1-216ENST00000566663 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
NAE1-216ENST00000566663 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
NAE1-216ENST00000566663 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
NAE1-216ENST00000566663 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
NAE1-216ENST00000566663 KCNA4P22459 653 aa17.52■□□□□ 0.4
NAE1-216ENST00000566663 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
NAE1-216ENST00000566663 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
NAE1-216ENST00000566663 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
NAE1-216ENST00000566663 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
NAE1-216ENST00000566663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
NAE1-216ENST00000566663 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
NAE1-216ENST00000566663 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
NAE1-216ENST00000566663 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
NAE1-216ENST00000566663 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
NAE1-216ENST00000566663 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
NAE1-216ENST00000566663 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
NAE1-216ENST00000566663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
NAE1-216ENST00000566663 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
NAE1-216ENST00000566663 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
NAE1-216ENST00000566663 ZBTB22O15209 634 aa16.13■□□□□ 0.17
NAE1-216ENST00000566663 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
NAE1-216ENST00000566663 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
NAE1-216ENST00000566663 APLP2Q06481 763 aa16.08■□□□□ 0.16
NAE1-216ENST00000566663 CAPN15O75808 1086 aa16.07■□□□□ 0.16
NAE1-216ENST00000566663 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
NAE1-216ENST00000566663 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
NAE1-216ENST00000566663 DSG3P32926 999 aa15.9■□□□□ 0.14
NAE1-216ENST00000566663 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
NAE1-216ENST00000566663 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
NAE1-216ENST00000566663 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
NAE1-216ENST00000566663 ABCB7O75027 752 aa15.73■□□□□ 0.11
NAE1-216ENST00000566663 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
NAE1-216ENST00000566663 POLA2Q14181 598 aa15.58■□□□□ 0.08
NAE1-216ENST00000566663 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
NAE1-216ENST00000566663 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
NAE1-216ENST00000566663 FBLN2P98095 1184 aa15.11■□□□□ 0.01
NAE1-216ENST00000566663 OSCARQ8IYS5 282 aa15.08■□□□□ 0
NAE1-216ENST00000566663 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
NAE1-216ENST00000566663 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
NAE1-216ENST00000566663 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
NAE1-216ENST00000566663 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
NAE1-216ENST00000566663 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
NAE1-216ENST00000566663 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
NAE1-216ENST00000566663 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
NAE1-216ENST00000566663 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
NAE1-216ENST00000566663 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
NAE1-216ENST00000566663 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
NAE1-216ENST00000566663 POTEHQ6S545 545 aa14.57□□□□□ -0.08
NAE1-216ENST00000566663 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
NAE1-216ENST00000566663 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
NAE1-216ENST00000566663 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
NAE1-216ENST00000566663 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
NAE1-216ENST00000566663 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
NAE1-216ENST00000566663 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
NAE1-216ENST00000566663 PROM2Q8N271 834 aa14.3□□□□□ -0.12
NAE1-216ENST00000566663 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
NAE1-216ENST00000566663 FKBP8Q14318 412 aa14.25□□□□□ -0.13
NAE1-216ENST00000566663 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
NAE1-216ENST00000566663 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
NAE1-216ENST00000566663 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
NAE1-216ENST00000566663 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
NAE1-216ENST00000566663 HAX1O00165 279 aa14□□□□□ -0.17
NAE1-216ENST00000566663 FARP1Q9Y4F1 1045 aaPredicted RBP13.98□□□□□ -0.17
NAE1-216ENST00000566663 C19orf67A6NJJ6 358 aa13.91□□□□□ -0.18
NAE1-216ENST00000566663 EVX2Q03828 476 aa13.87□□□□□ -0.19
NAE1-216ENST00000566663 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
NAE1-216ENST00000566663 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
NAE1-216ENST00000566663 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
NAE1-216ENST00000566663 MIER1Q8N108 512 aa13.82□□□□□ -0.2
NAE1-216ENST00000566663 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
NAE1-216ENST00000566663 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
NAE1-216ENST00000566663 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
NAE1-216ENST00000566663 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
NAE1-216ENST00000566663 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
NAE1-216ENST00000566663 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
NAE1-216ENST00000566663 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
NAE1-216ENST00000566663 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
NAE1-216ENST00000566663 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
NAE1-216ENST00000566663 GABBR2O75899 941 aa13.59□□□□□ -0.23
NAE1-216ENST00000566663 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
NAE1-216ENST00000566663 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
NAE1-216ENST00000566663 CLCN6P51797 869 aa13.53□□□□□ -0.24
NAE1-216ENST00000566663 NUBP1P53384 320 aa13.53□□□□□ -0.24
NAE1-216ENST00000566663 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
NAE1-216ENST00000566663 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms