RNA–Protein interactions for RNA: ENST00000566566.2

GCSH-205, Transcript of glycine cleavage system protein H, humanhuman

TSL 5

Gene GCSH, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-205ENST00000566566 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
GCSH-205ENST00000566566 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
GCSH-205ENST00000566566 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
GCSH-205ENST00000566566 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
GCSH-205ENST00000566566 FOXD1Q16676 465 aa18.77■□□□□ 0.6
GCSH-205ENST00000566566 POTEDQ86YR6 584 aa18■□□□□ 0.47
GCSH-205ENST00000566566 MSH5O43196 834 aa17.79■□□□□ 0.44
GCSH-205ENST00000566566 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
GCSH-205ENST00000566566 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
GCSH-205ENST00000566566 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
GCSH-205ENST00000566566 ADRA2BP18089 450 aa17.16■□□□□ 0.34
GCSH-205ENST00000566566 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
GCSH-205ENST00000566566 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
GCSH-205ENST00000566566 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
GCSH-205ENST00000566566 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
GCSH-205ENST00000566566 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
GCSH-205ENST00000566566 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
GCSH-205ENST00000566566 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
GCSH-205ENST00000566566 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
GCSH-205ENST00000566566 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
GCSH-205ENST00000566566 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
GCSH-205ENST00000566566 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
GCSH-205ENST00000566566 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
GCSH-205ENST00000566566 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
GCSH-205ENST00000566566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
GCSH-205ENST00000566566 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
GCSH-205ENST00000566566 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
GCSH-205ENST00000566566 POTEHQ6S545 545 aa14.05□□□□□ -0.16
GCSH-205ENST00000566566 CAPN15O75808 1086 aa14.03□□□□□ -0.16
GCSH-205ENST00000566566 DSG3P32926 999 aa14.01□□□□□ -0.17
GCSH-205ENST00000566566 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
GCSH-205ENST00000566566 APLP2Q06481 763 aa13.74□□□□□ -0.21
GCSH-205ENST00000566566 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
GCSH-205ENST00000566566 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
GCSH-205ENST00000566566 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
GCSH-205ENST00000566566 ABCB7O75027 752 aa13.63□□□□□ -0.23
GCSH-205ENST00000566566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
GCSH-205ENST00000566566 KCNA4P22459 653 aa13.61□□□□□ -0.23
GCSH-205ENST00000566566 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
GCSH-205ENST00000566566 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
GCSH-205ENST00000566566 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
GCSH-205ENST00000566566 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
GCSH-205ENST00000566566 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
GCSH-205ENST00000566566 POLA2Q14181 598 aa13.23□□□□□ -0.29
GCSH-205ENST00000566566 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
GCSH-205ENST00000566566 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
GCSH-205ENST00000566566 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
GCSH-205ENST00000566566 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
GCSH-205ENST00000566566 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
GCSH-205ENST00000566566 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
GCSH-205ENST00000566566 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
GCSH-205ENST00000566566 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
GCSH-205ENST00000566566 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
GCSH-205ENST00000566566 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
GCSH-205ENST00000566566 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
GCSH-205ENST00000566566 HAX1O00165 279 aa12.76□□□□□ -0.37
GCSH-205ENST00000566566 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
GCSH-205ENST00000566566 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
GCSH-205ENST00000566566 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
GCSH-205ENST00000566566 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
GCSH-205ENST00000566566 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
GCSH-205ENST00000566566 ZBTB22O15209 634 aa12.5□□□□□ -0.41
GCSH-205ENST00000566566 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
GCSH-205ENST00000566566 EVX2Q03828 476 aa12.49□□□□□ -0.41
GCSH-205ENST00000566566 FBLN2P98095 1184 aa12.48□□□□□ -0.41
GCSH-205ENST00000566566 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
GCSH-205ENST00000566566 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
GCSH-205ENST00000566566 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
GCSH-205ENST00000566566 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
GCSH-205ENST00000566566 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
GCSH-205ENST00000566566 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
GCSH-205ENST00000566566 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
GCSH-205ENST00000566566 GABBR2O75899 941 aa12.24□□□□□ -0.45
GCSH-205ENST00000566566 LHX8Q68G74 356 aa12.18□□□□□ -0.46
GCSH-205ENST00000566566 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
GCSH-205ENST00000566566 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
GCSH-205ENST00000566566 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
GCSH-205ENST00000566566 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
GCSH-205ENST00000566566 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
GCSH-205ENST00000566566 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
GCSH-205ENST00000566566 CLCN6P51797 869 aa11.98□□□□□ -0.49
GCSH-205ENST00000566566 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
GCSH-205ENST00000566566 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
GCSH-205ENST00000566566 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
GCSH-205ENST00000566566 DCBLD2Q96PD2 775 aa11.87□□□□□ -0.51
GCSH-205ENST00000566566 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
GCSH-205ENST00000566566 FKBP8Q14318 412 aa11.78□□□□□ -0.52
GCSH-205ENST00000566566 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
GCSH-205ENST00000566566 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
GCSH-205ENST00000566566 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
GCSH-205ENST00000566566 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
GCSH-205ENST00000566566 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
GCSH-205ENST00000566566 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
GCSH-205ENST00000566566 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
GCSH-205ENST00000566566 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
GCSH-205ENST00000566566 PHF12Q96QT6 1004 aa11.54□□□□□ -0.56
GCSH-205ENST00000566566 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
GCSH-205ENST00000566566 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
GCSH-205ENST00000566566 POTEMA6NI47 508 aa11.48□□□□□ -0.57
GCSH-205ENST00000566566 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms