RNA–Protein interactions for RNA: ENST00000566474.5

TMEM87A-209, Transcript of transmembrane protein 87A, humanhuman

TSL 4

Gene TMEM87A, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-209ENST00000566474 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
TMEM87A-209ENST00000566474 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
TMEM87A-209ENST00000566474 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
TMEM87A-209ENST00000566474 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
TMEM87A-209ENST00000566474 FOXD1Q16676 465 aa22.1■■□□□ 1.13
TMEM87A-209ENST00000566474 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
TMEM87A-209ENST00000566474 MSH5O43196 834 aa20.73■□□□□ 0.91
TMEM87A-209ENST00000566474 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
TMEM87A-209ENST00000566474 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
TMEM87A-209ENST00000566474 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
TMEM87A-209ENST00000566474 ADRA2BP18089 450 aa20.46■□□□□ 0.87
TMEM87A-209ENST00000566474 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
TMEM87A-209ENST00000566474 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
TMEM87A-209ENST00000566474 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
TMEM87A-209ENST00000566474 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
TMEM87A-209ENST00000566474 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
TMEM87A-209ENST00000566474 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
TMEM87A-209ENST00000566474 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
TMEM87A-209ENST00000566474 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
TMEM87A-209ENST00000566474 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
TMEM87A-209ENST00000566474 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
TMEM87A-209ENST00000566474 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
TMEM87A-209ENST00000566474 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
TMEM87A-209ENST00000566474 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
TMEM87A-209ENST00000566474 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
TMEM87A-209ENST00000566474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
TMEM87A-209ENST00000566474 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
TMEM87A-209ENST00000566474 KCNA4P22459 653 aa16.73■□□□□ 0.27
TMEM87A-209ENST00000566474 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
TMEM87A-209ENST00000566474 CAPN15O75808 1086 aa16.56■□□□□ 0.24
TMEM87A-209ENST00000566474 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
TMEM87A-209ENST00000566474 DSG3P32926 999 aa16.5■□□□□ 0.23
TMEM87A-209ENST00000566474 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
TMEM87A-209ENST00000566474 APLP2Q06481 763 aa16.24■□□□□ 0.19
TMEM87A-209ENST00000566474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
TMEM87A-209ENST00000566474 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
TMEM87A-209ENST00000566474 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
TMEM87A-209ENST00000566474 ABCB7O75027 752 aa16.16■□□□□ 0.18
TMEM87A-209ENST00000566474 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
TMEM87A-209ENST00000566474 POTEHQ6S545 545 aa16.08■□□□□ 0.16
TMEM87A-209ENST00000566474 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
TMEM87A-209ENST00000566474 POLA2Q14181 598 aa15.77■□□□□ 0.12
TMEM87A-209ENST00000566474 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
TMEM87A-209ENST00000566474 RBM42Q9BTD8 480 aaKnown RBP15.73■□□□□ 0.11
TMEM87A-209ENST00000566474 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
TMEM87A-209ENST00000566474 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
TMEM87A-209ENST00000566474 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
TMEM87A-209ENST00000566474 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
TMEM87A-209ENST00000566474 ZBTB22O15209 634 aa15.38■□□□□ 0.05
TMEM87A-209ENST00000566474 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
TMEM87A-209ENST00000566474 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
TMEM87A-209ENST00000566474 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
TMEM87A-209ENST00000566474 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
TMEM87A-209ENST00000566474 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
TMEM87A-209ENST00000566474 PITPNM1O00562 1244 aa15.04■□□□□ -0
TMEM87A-209ENST00000566474 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
TMEM87A-209ENST00000566474 FXR2P51116 673 aaKnown RBP eCLIP14.96□□□□□ -0.01
TMEM87A-209ENST00000566474 FBLN2P98095 1184 aa14.96□□□□□ -0.01
TMEM87A-209ENST00000566474 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
TMEM87A-209ENST00000566474 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
TMEM87A-209ENST00000566474 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
TMEM87A-209ENST00000566474 HAX1O00165 279 aa14.85□□□□□ -0.03
TMEM87A-209ENST00000566474 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
TMEM87A-209ENST00000566474 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
TMEM87A-209ENST00000566474 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
TMEM87A-209ENST00000566474 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
TMEM87A-209ENST00000566474 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
TMEM87A-209ENST00000566474 EVX2Q03828 476 aa14.67□□□□□ -0.06
TMEM87A-209ENST00000566474 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
TMEM87A-209ENST00000566474 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMEM87A-209ENST00000566474 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
TMEM87A-209ENST00000566474 C19orf67A6NJJ6 358 aa14.48□□□□□ -0.09
TMEM87A-209ENST00000566474 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
TMEM87A-209ENST00000566474 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
TMEM87A-209ENST00000566474 GABBR2O75899 941 aa14.33□□□□□ -0.12
TMEM87A-209ENST00000566474 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
TMEM87A-209ENST00000566474 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
TMEM87A-209ENST00000566474 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
TMEM87A-209ENST00000566474 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
TMEM87A-209ENST00000566474 LHX8Q68G74 356 aa14.06□□□□□ -0.16
TMEM87A-209ENST00000566474 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
TMEM87A-209ENST00000566474 CREBZFQ9NS37 354 aa14.05□□□□□ -0.16
TMEM87A-209ENST00000566474 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
TMEM87A-209ENST00000566474 CLCN6P51797 869 aa14□□□□□ -0.17
TMEM87A-209ENST00000566474 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
TMEM87A-209ENST00000566474 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
TMEM87A-209ENST00000566474 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
TMEM87A-209ENST00000566474 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
TMEM87A-209ENST00000566474 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
TMEM87A-209ENST00000566474 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
TMEM87A-209ENST00000566474 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
TMEM87A-209ENST00000566474 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
TMEM87A-209ENST00000566474 PROM2Q8N271 834 aa13.67□□□□□ -0.22
TMEM87A-209ENST00000566474 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
TMEM87A-209ENST00000566474 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
TMEM87A-209ENST00000566474 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
TMEM87A-209ENST00000566474 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
TMEM87A-209ENST00000566474 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
TMEM87A-209ENST00000566474 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
TMEM87A-209ENST00000566474 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms