RNA–Protein interactions for RNA: ENST00000566281.1

CBFB-207, Transcript of core-binding factor subunit beta, humanhuman

TSL 2

Gene CBFB, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-207ENST00000566281 AEBP2Q6ZN18 517 aaPredicted RBP35.38■■■■□ 3.25
CBFB-207ENST00000566281 CHIC1Q5VXU3 224 aa33.34■■■□□ 2.93
CBFB-207ENST00000566281 SENP3Q9H4L4 574 aaPredicted RBP30.29■■■□□ 2.44
CBFB-207ENST00000566281 PHF23Q9BUL5 403 aaPredicted RBP29.81■■■□□ 2.36
CBFB-207ENST00000566281 FOXD1Q16676 465 aa28.22■■■□□ 2.11
CBFB-207ENST00000566281 MSH5O43196 834 aa26.58■■□□□ 1.85
CBFB-207ENST00000566281 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
CBFB-207ENST00000566281 POTEDQ86YR6 584 aa26.43■■□□□ 1.82
CBFB-207ENST00000566281 PIAS4Q8N2W9 510 aaPredicted RBP26.26■■□□□ 1.79
CBFB-207ENST00000566281 PPP6R1Q9UPN7 881 aa26.12■■□□□ 1.77
CBFB-207ENST00000566281 ADRA2BP18089 450 aa26■■□□□ 1.75
CBFB-207ENST00000566281 DMRT2Q9Y5R5 561 aa23.97■■□□□ 1.43
CBFB-207ENST00000566281 MAPK8IP2Q13387 824 aaPredicted RBP23.96■■□□□ 1.43
CBFB-207ENST00000566281 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
CBFB-207ENST00000566281 PPP4R3CPQ6ZMV5 832 aa23.15■■□□□ 1.3
CBFB-207ENST00000566281 HOXD11P31277 338 aaPredicted RBP22.99■■□□□ 1.27
CBFB-207ENST00000566281 CACNB1Q02641 598 aaPredicted RBP22.92■■□□□ 1.26
CBFB-207ENST00000566281 DCAF8L1A6NGE4 600 aa22.84■■□□□ 1.25
CBFB-207ENST00000566281 CNKSR2Q8WXI2 1034 aa22.83■■□□□ 1.25
CBFB-207ENST00000566281 RNF216Q9NWF9 866 aaPredicted RBP22.72■■□□□ 1.23
CBFB-207ENST00000566281 RNF39Q9H2S5 420 aa22.65■■□□□ 1.22
CBFB-207ENST00000566281 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
CBFB-207ENST00000566281 C1QBPQ07021 282 aaKnown RBP22.32■■□□□ 1.16
CBFB-207ENST00000566281 NCBP3Q53F19 620 aaKnown RBP22.2■■□□□ 1.14
CBFB-207ENST00000566281 NPM3O75607 178 aaKnown RBP21.84■■□□□ 1.09
CBFB-207ENST00000566281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.084e-6■■■□□ 17.8
CBFB-207ENST00000566281 U3KPZ7 1027 aaPredicted RBP21.35■■□□□ 1.01
CBFB-207ENST00000566281 KCNA4P22459 653 aa21.11■□□□□ 0.97
CBFB-207ENST00000566281 SPINK5Q9NQ38 1064 aaPredicted RBP21.09■□□□□ 0.97
CBFB-207ENST00000566281 DSG3P32926 999 aa21.08■□□□□ 0.97
CBFB-207ENST00000566281 CAPN15O75808 1086 aa21.05■□□□□ 0.96
CBFB-207ENST00000566281 SLC4A2P04920 1241 aa20.96■□□□□ 0.95
CBFB-207ENST00000566281 APLP2Q06481 763 aa20.78■□□□□ 0.92
CBFB-207ENST00000566281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
CBFB-207ENST00000566281 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
CBFB-207ENST00000566281 ZNF219Q9P2Y4 722 aaPredicted RBP20.68■□□□□ 0.9
CBFB-207ENST00000566281 POTEHQ6S545 545 aa20.65■□□□□ 0.9
CBFB-207ENST00000566281 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
CBFB-207ENST00000566281 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
CBFB-207ENST00000566281 ABCB7O75027 752 aa20.51■□□□□ 0.87
CBFB-207ENST00000566281 MYCNP04198 464 aaPredicted RBP20.25■□□□□ 0.83
CBFB-207ENST00000566281 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
CBFB-207ENST00000566281 POLA2Q14181 598 aa20.04■□□□□ 0.8
CBFB-207ENST00000566281 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
CBFB-207ENST00000566281 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
CBFB-207ENST00000566281 CHRDL2Q6WN34 429 aa19.79■□□□□ 0.76
CBFB-207ENST00000566281 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
CBFB-207ENST00000566281 ZBTB12Q9Y330 459 aaPredicted RBP19.7■□□□□ 0.74
CBFB-207ENST00000566281 AKT1S1Q96B36 256 aa19.63■□□□□ 0.73
CBFB-207ENST00000566281 ZBTB22O15209 634 aa19.4■□□□□ 0.7
CBFB-207ENST00000566281 REM2Q8IYK8 340 aaPredicted RBP19.4■□□□□ 0.7
CBFB-207ENST00000566281 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
CBFB-207ENST00000566281 ATXN8OSP0DMR3 200 aa19.35■□□□□ 0.69
CBFB-207ENST00000566281 PIP4P2Q8N4L2 257 aa19.25■□□□□ 0.67
CBFB-207ENST00000566281 SP7Q8TDD2 431 aaPredicted RBP19.22■□□□□ 0.67
CBFB-207ENST00000566281 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
CBFB-207ENST00000566281 FXR2P51116 673 aaKnown RBP eCLIP19.14■□□□□ 0.65
CBFB-207ENST00000566281 SPDYE2BA6NHP3 402 aa19.06■□□□□ 0.64
CBFB-207ENST00000566281 SPDYE6P0CI01 402 aa19.06■□□□□ 0.64
CBFB-207ENST00000566281 SPDYE2Q495Y8 402 aa19.06■□□□□ 0.64
CBFB-207ENST00000566281 FBLN2P98095 1184 aa19.03■□□□□ 0.64
CBFB-207ENST00000566281 HAX1O00165 279 aa18.95■□□□□ 0.62
CBFB-207ENST00000566281 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
CBFB-207ENST00000566281 SPDYE1Q8NFV5 336 aaPredicted RBP18.78■□□□□ 0.6
CBFB-207ENST00000566281 SSUH2Q9Y2M2 353 aa18.77■□□□□ 0.6
CBFB-207ENST00000566281 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
CBFB-207ENST00000566281 EVX2Q03828 476 aa18.69■□□□□ 0.58
CBFB-207ENST00000566281 PRKAR2AP13861 404 aaKnown RBP18.66■□□□□ 0.58
CBFB-207ENST00000566281 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
CBFB-207ENST00000566281 C19orf67A6NJJ6 358 aa18.53■□□□□ 0.56
CBFB-207ENST00000566281 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
CBFB-207ENST00000566281 PRR29P0C7W0 189 aa18.36■□□□□ 0.53
CBFB-207ENST00000566281 CHADLQ6NUI6 762 aa18.33■□□□□ 0.52
CBFB-207ENST00000566281 GABBR2O75899 941 aa18.29■□□□□ 0.52
CBFB-207ENST00000566281 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
CBFB-207ENST00000566281 FARP1Q9Y4F1 1045 aaPredicted RBP18.11■□□□□ 0.49
CBFB-207ENST00000566281 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
CBFB-207ENST00000566281 CLCN6P51797 869 aa18.04■□□□□ 0.48
CBFB-207ENST00000566281 LHX8Q68G74 356 aa18.01■□□□□ 0.47
CBFB-207ENST00000566281 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
CBFB-207ENST00000566281 POTEIP0CG38 1075 aa17.9■□□□□ 0.46
CBFB-207ENST00000566281 CREBZFQ9NS37 354 aa17.85■□□□□ 0.45
CBFB-207ENST00000566281 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.44
CBFB-207ENST00000566281 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.44
CBFB-207ENST00000566281 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
CBFB-207ENST00000566281 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
CBFB-207ENST00000566281 DCBLD2Q96PD2 775 aa17.71■□□□□ 0.43
CBFB-207ENST00000566281 GALR2O43603 387 aaPredicted RBP17.56■□□□□ 0.4
CBFB-207ENST00000566281 PAK3O75914 559 aaPredicted RBP17.55■□□□□ 0.4
CBFB-207ENST00000566281 MNX1P50219 401 aaPredicted RBP17.55■□□□□ 0.4
CBFB-207ENST00000566281 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
CBFB-207ENST00000566281 PHF12Q96QT6 1004 aa17.45■□□□□ 0.38
CBFB-207ENST00000566281 PROM2Q8N271 834 aa17.41■□□□□ 0.38
CBFB-207ENST00000566281 OTUD5Q96G74 571 aa17.31■□□□□ 0.36
CBFB-207ENST00000566281 POTEB2H3BUK9 544 aa17.29■□□□□ 0.36
CBFB-207ENST00000566281 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
CBFB-207ENST00000566281 ASTLQ6HA08 431 aaPredicted RBP17.25■□□□□ 0.35
CBFB-207ENST00000566281 MS4A3Q96HJ5 214 aa17.23■□□□□ 0.35
CBFB-207ENST00000566281 ATMINO43313 823 aaPredicted RBP17.17■□□□□ 0.34
CBFB-207ENST00000566281 SLC39A7Q92504 469 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms