RNA–Protein interactions for RNA: ENST00000566131.1

USP7-213, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 2

Gene USP7, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-213ENST00000566131 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.42
USP7-213ENST00000566131 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
USP7-213ENST00000566131 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
USP7-213ENST00000566131 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
USP7-213ENST00000566131 FOXD1Q16676 465 aa19.12■□□□□ 0.65
USP7-213ENST00000566131 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
USP7-213ENST00000566131 MSH5O43196 834 aa17.95■□□□□ 0.46
USP7-213ENST00000566131 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
USP7-213ENST00000566131 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
USP7-213ENST00000566131 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
USP7-213ENST00000566131 ADRA2BP18089 450 aa17.57■□□□□ 0.4
USP7-213ENST00000566131 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
USP7-213ENST00000566131 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
USP7-213ENST00000566131 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
USP7-213ENST00000566131 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
USP7-213ENST00000566131 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
USP7-213ENST00000566131 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
USP7-213ENST00000566131 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
USP7-213ENST00000566131 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
USP7-213ENST00000566131 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
USP7-213ENST00000566131 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
USP7-213ENST00000566131 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
USP7-213ENST00000566131 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
USP7-213ENST00000566131 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
USP7-213ENST00000566131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.062e-10■■■□□ 18.1
USP7-213ENST00000566131 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
USP7-213ENST00000566131 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
USP7-213ENST00000566131 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
USP7-213ENST00000566131 CAPN15O75808 1086 aa14.25□□□□□ -0.13
USP7-213ENST00000566131 DSG3P32926 999 aa14.24□□□□□ -0.13
USP7-213ENST00000566131 POTEHQ6S545 545 aa14.14□□□□□ -0.15
USP7-213ENST00000566131 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
USP7-213ENST00000566131 KCNA4P22459 653 aa14.04□□□□□ -0.16
USP7-213ENST00000566131 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
USP7-213ENST00000566131 ABCB7O75027 752 aa13.92□□□□□ -0.18
USP7-213ENST00000566131 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
USP7-213ENST00000566131 APLP2Q06481 763 aa13.83□□□□□ -0.2
USP7-213ENST00000566131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
USP7-213ENST00000566131 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
USP7-213ENST00000566131 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
USP7-213ENST00000566131 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
USP7-213ENST00000566131 POLA2Q14181 598 aa13.5□□□□□ -0.25
USP7-213ENST00000566131 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
USP7-213ENST00000566131 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
USP7-213ENST00000566131 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
USP7-213ENST00000566131 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
USP7-213ENST00000566131 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
USP7-213ENST00000566131 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
USP7-213ENST00000566131 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
USP7-213ENST00000566131 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
USP7-213ENST00000566131 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
USP7-213ENST00000566131 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
USP7-213ENST00000566131 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
USP7-213ENST00000566131 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
USP7-213ENST00000566131 ZBTB22O15209 634 aa12.92□□□□□ -0.34
USP7-213ENST00000566131 HAX1O00165 279 aa12.91□□□□□ -0.34
USP7-213ENST00000566131 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.347e-10■□□□□ 11
USP7-213ENST00000566131 EVX2Q03828 476 aa12.78□□□□□ -0.36
USP7-213ENST00000566131 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
USP7-213ENST00000566131 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
USP7-213ENST00000566131 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
USP7-213ENST00000566131 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
USP7-213ENST00000566131 FBLN2P98095 1184 aa12.68□□□□□ -0.38
USP7-213ENST00000566131 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
USP7-213ENST00000566131 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
USP7-213ENST00000566131 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
USP7-213ENST00000566131 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
USP7-213ENST00000566131 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
USP7-213ENST00000566131 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
USP7-213ENST00000566131 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
USP7-213ENST00000566131 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
USP7-213ENST00000566131 GABBR2O75899 941 aa12.42□□□□□ -0.42
USP7-213ENST00000566131 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP7-213ENST00000566131 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
USP7-213ENST00000566131 LHX8Q68G74 356 aa12.29□□□□□ -0.44
USP7-213ENST00000566131 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
USP7-213ENST00000566131 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
USP7-213ENST00000566131 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
USP7-213ENST00000566131 CLCN6P51797 869 aa12.01□□□□□ -0.49
USP7-213ENST00000566131 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
USP7-213ENST00000566131 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
USP7-213ENST00000566131 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
USP7-213ENST00000566131 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
USP7-213ENST00000566131 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
USP7-213ENST00000566131 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
USP7-213ENST00000566131 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
USP7-213ENST00000566131 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
USP7-213ENST00000566131 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
USP7-213ENST00000566131 POTEB2H3BUK9 544 aa11.79□□□□□ -0.52
USP7-213ENST00000566131 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
USP7-213ENST00000566131 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
USP7-213ENST00000566131 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
USP7-213ENST00000566131 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
USP7-213ENST00000566131 PELP1Q8IZL8 1130 aaKnown RBP11.72□□□□□ -0.53
USP7-213ENST00000566131 NPM1P06748 294 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP7-213ENST00000566131 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
USP7-213ENST00000566131 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
USP7-213ENST00000566131 ASTLQ6HA08 431 aaPredicted RBP11.59□□□□□ -0.55
USP7-213ENST00000566131 POTEMA6NI47 508 aa11.58□□□□□ -0.56
USP7-213ENST00000566131 ATMINO43313 823 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms