RNA–Protein interactions for RNA: ENST00000565868.5

ITGA11-204, Transcript of integrin subunit alpha 11, humanhuman

TSL 3

Gene ITGA11, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA11-204ENST00000565868 AEBP2Q6ZN18 517 aaPredicted RBP29.21■■■□□ 2.27
ITGA11-204ENST00000565868 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
ITGA11-204ENST00000565868 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
ITGA11-204ENST00000565868 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
ITGA11-204ENST00000565868 FOXD1Q16676 465 aa23.21■■□□□ 1.31
ITGA11-204ENST00000565868 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
ITGA11-204ENST00000565868 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
ITGA11-204ENST00000565868 ADRA2BP18089 450 aa21.62■■□□□ 1.05
ITGA11-204ENST00000565868 MSH5O43196 834 aa21.61■■□□□ 1.05
ITGA11-204ENST00000565868 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
ITGA11-204ENST00000565868 POTEDQ86YR6 584 aa21.28■■□□□ 1
ITGA11-204ENST00000565868 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
ITGA11-204ENST00000565868 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
ITGA11-204ENST00000565868 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
ITGA11-204ENST00000565868 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
ITGA11-204ENST00000565868 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
ITGA11-204ENST00000565868 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
ITGA11-204ENST00000565868 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
ITGA11-204ENST00000565868 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
ITGA11-204ENST00000565868 CACNB1Q02641 598 aaPredicted RBP18.61■□□□□ 0.57
ITGA11-204ENST00000565868 RNF39Q9H2S5 420 aa18.5■□□□□ 0.55
ITGA11-204ENST00000565868 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
ITGA11-204ENST00000565868 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
ITGA11-204ENST00000565868 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
ITGA11-204ENST00000565868 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
ITGA11-204ENST00000565868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
ITGA11-204ENST00000565868 KCNA4P22459 653 aa17.94■□□□□ 0.46
ITGA11-204ENST00000565868 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
ITGA11-204ENST00000565868 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
ITGA11-204ENST00000565868 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
ITGA11-204ENST00000565868 CAPN15O75808 1086 aa17.36■□□□□ 0.37
ITGA11-204ENST00000565868 DSG3P32926 999 aa17.34■□□□□ 0.37
ITGA11-204ENST00000565868 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
ITGA11-204ENST00000565868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
ITGA11-204ENST00000565868 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
ITGA11-204ENST00000565868 ABCB7O75027 752 aa16.99■□□□□ 0.31
ITGA11-204ENST00000565868 APLP2Q06481 763 aa16.99■□□□□ 0.31
ITGA11-204ENST00000565868 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
ITGA11-204ENST00000565868 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
ITGA11-204ENST00000565868 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
ITGA11-204ENST00000565868 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
ITGA11-204ENST00000565868 POLA2Q14181 598 aa16.66■□□□□ 0.26
ITGA11-204ENST00000565868 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
ITGA11-204ENST00000565868 POTEHQ6S545 545 aa16.63■□□□□ 0.25
ITGA11-204ENST00000565868 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
ITGA11-204ENST00000565868 ZBTB22O15209 634 aa16.52■□□□□ 0.24
ITGA11-204ENST00000565868 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
ITGA11-204ENST00000565868 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
ITGA11-204ENST00000565868 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
ITGA11-204ENST00000565868 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
ITGA11-204ENST00000565868 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
ITGA11-204ENST00000565868 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
ITGA11-204ENST00000565868 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
ITGA11-204ENST00000565868 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
ITGA11-204ENST00000565868 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
ITGA11-204ENST00000565868 FBLN2P98095 1184 aa15.79■□□□□ 0.12
ITGA11-204ENST00000565868 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
ITGA11-204ENST00000565868 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
ITGA11-204ENST00000565868 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
ITGA11-204ENST00000565868 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
ITGA11-204ENST00000565868 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
ITGA11-204ENST00000565868 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
ITGA11-204ENST00000565868 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
ITGA11-204ENST00000565868 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
ITGA11-204ENST00000565868 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
ITGA11-204ENST00000565868 HAX1O00165 279 aa15.49■□□□□ 0.07
ITGA11-204ENST00000565868 CLEC11AQ9Y240 323 aa15.48■□□□□ 0.07
ITGA11-204ENST00000565868 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
ITGA11-204ENST00000565868 EVX2Q03828 476 aa15.43■□□□□ 0.06
ITGA11-204ENST00000565868 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
ITGA11-204ENST00000565868 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
ITGA11-204ENST00000565868 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
ITGA11-204ENST00000565868 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
ITGA11-204ENST00000565868 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
ITGA11-204ENST00000565868 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
ITGA11-204ENST00000565868 GABBR2O75899 941 aa15□□□□□ -0.01
ITGA11-204ENST00000565868 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
ITGA11-204ENST00000565868 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
ITGA11-204ENST00000565868 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
ITGA11-204ENST00000565868 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
ITGA11-204ENST00000565868 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
ITGA11-204ENST00000565868 POTEIP0CG38 1075 aa14.74□□□□□ -0.05
ITGA11-204ENST00000565868 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
ITGA11-204ENST00000565868 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
ITGA11-204ENST00000565868 PROM2Q8N271 834 aa14.64□□□□□ -0.07
ITGA11-204ENST00000565868 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
ITGA11-204ENST00000565868 CLCN6P51797 869 aa14.62□□□□□ -0.07
ITGA11-204ENST00000565868 LHX8Q68G74 356 aa14.61□□□□□ -0.07
ITGA11-204ENST00000565868 GALR2O43603 387 aaPredicted RBP14.53□□□□□ -0.08
ITGA11-204ENST00000565868 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
ITGA11-204ENST00000565868 DCBLD2Q96PD2 775 aa14.5□□□□□ -0.09
ITGA11-204ENST00000565868 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
ITGA11-204ENST00000565868 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
ITGA11-204ENST00000565868 PELP1Q8IZL8 1130 aaKnown RBP14.31□□□□□ -0.12
ITGA11-204ENST00000565868 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
ITGA11-204ENST00000565868 MIER1Q8N108 512 aa14.3□□□□□ -0.12
ITGA11-204ENST00000565868 MS4A3Q96HJ5 214 aa14.28□□□□□ -0.12
ITGA11-204ENST00000565868 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
ITGA11-204ENST00000565868 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
ITGA11-204ENST00000565868 ASTLQ6HA08 431 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms