RNA–Protein interactions for RNA: ENST00000564665.1

GBP3-210, Transcript of guanylate binding protein 3, humanhuman

TSL 4

Gene GBP3, Length 599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-210ENST00000564665 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
GBP3-210ENST00000564665 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
GBP3-210ENST00000564665 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
GBP3-210ENST00000564665 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
GBP3-210ENST00000564665 FOXD1Q16676 465 aa16.14■□□□□ 0.17
GBP3-210ENST00000564665 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
GBP3-210ENST00000564665 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
GBP3-210ENST00000564665 ADRA2BP18089 450 aa15.35■□□□□ 0.05
GBP3-210ENST00000564665 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
GBP3-210ENST00000564665 MSH5O43196 834 aa15.02■□□□□ -0
GBP3-210ENST00000564665 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
GBP3-210ENST00000564665 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
GBP3-210ENST00000564665 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
GBP3-210ENST00000564665 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
GBP3-210ENST00000564665 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
GBP3-210ENST00000564665 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
GBP3-210ENST00000564665 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
GBP3-210ENST00000564665 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
GBP3-210ENST00000564665 KCNA4P22459 653 aa13.48□□□□□ -0.25
GBP3-210ENST00000564665 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
GBP3-210ENST00000564665 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
GBP3-210ENST00000564665 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
GBP3-210ENST00000564665 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
GBP3-210ENST00000564665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
GBP3-210ENST00000564665 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
GBP3-210ENST00000564665 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
GBP3-210ENST00000564665 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
GBP3-210ENST00000564665 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
GBP3-210ENST00000564665 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
GBP3-210ENST00000564665 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
GBP3-210ENST00000564665 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
GBP3-210ENST00000564665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
GBP3-210ENST00000564665 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
GBP3-210ENST00000564665 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
GBP3-210ENST00000564665 APLP2Q06481 763 aa12.4□□□□□ -0.42
GBP3-210ENST00000564665 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
GBP3-210ENST00000564665 ZBTB22O15209 634 aa12.36□□□□□ -0.43
GBP3-210ENST00000564665 CAPN15O75808 1086 aa12.32□□□□□ -0.44
GBP3-210ENST00000564665 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
GBP3-210ENST00000564665 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
GBP3-210ENST00000564665 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
GBP3-210ENST00000564665 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
GBP3-210ENST00000564665 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
GBP3-210ENST00000564665 DSG3P32926 999 aa12.13□□□□□ -0.47
GBP3-210ENST00000564665 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
GBP3-210ENST00000564665 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
GBP3-210ENST00000564665 ABCB7O75027 752 aa12.04□□□□□ -0.48
GBP3-210ENST00000564665 POLA2Q14181 598 aa11.95□□□□□ -0.5
GBP3-210ENST00000564665 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
GBP3-210ENST00000564665 FBLN2P98095 1184 aa11.66□□□□□ -0.54
GBP3-210ENST00000564665 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
GBP3-210ENST00000564665 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
GBP3-210ENST00000564665 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
GBP3-210ENST00000564665 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
GBP3-210ENST00000564665 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
GBP3-210ENST00000564665 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
GBP3-210ENST00000564665 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
GBP3-210ENST00000564665 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
GBP3-210ENST00000564665 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
GBP3-210ENST00000564665 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
GBP3-210ENST00000564665 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
GBP3-210ENST00000564665 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
GBP3-210ENST00000564665 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
GBP3-210ENST00000564665 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
GBP3-210ENST00000564665 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
GBP3-210ENST00000564665 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
GBP3-210ENST00000564665 FKBP8Q14318 412 aa11.05□□□□□ -0.64
GBP3-210ENST00000564665 POTEHQ6S545 545 aa11.05□□□□□ -0.64
GBP3-210ENST00000564665 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
GBP3-210ENST00000564665 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
GBP3-210ENST00000564665 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
GBP3-210ENST00000564665 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
GBP3-210ENST00000564665 PROM2Q8N271 834 aa10.97□□□□□ -0.65
GBP3-210ENST00000564665 PRKAR2AP13861 404 aaKnown RBP10.88□□□□□ -0.67
GBP3-210ENST00000564665 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
GBP3-210ENST00000564665 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
GBP3-210ENST00000564665 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
GBP3-210ENST00000564665 HAX1O00165 279 aa10.71□□□□□ -0.69
GBP3-210ENST00000564665 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
GBP3-210ENST00000564665 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
GBP3-210ENST00000564665 MIER1Q8N108 512 aa10.69□□□□□ -0.7
GBP3-210ENST00000564665 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
GBP3-210ENST00000564665 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
GBP3-210ENST00000564665 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
GBP3-210ENST00000564665 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
GBP3-210ENST00000564665 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
GBP3-210ENST00000564665 CD44P16070 742 aaKnown RBP10.56□□□□□ -0.72
GBP3-210ENST00000564665 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
GBP3-210ENST00000564665 EVX2Q03828 476 aa10.53□□□□□ -0.72
GBP3-210ENST00000564665 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
GBP3-210ENST00000564665 PAK3O75914 559 aaPredicted RBP10.52□□□□□ -0.73
GBP3-210ENST00000564665 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
GBP3-210ENST00000564665 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
GBP3-210ENST00000564665 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
GBP3-210ENST00000564665 CLCN6P51797 869 aa10.41□□□□□ -0.74
GBP3-210ENST00000564665 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
GBP3-210ENST00000564665 NUBP1P53384 320 aa10.39□□□□□ -0.75
GBP3-210ENST00000564665 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
GBP3-210ENST00000564665 IFNLR1Q8IU57 520 aaPredicted RBP10.38□□□□□ -0.75
GBP3-210ENST00000564665 GABBR2O75899 941 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms