RNA–Protein interactions for RNA: ENST00000564329.1

TMEM87A-207, Transcript of transmembrane protein 87A, humanhuman

TSL 3

Gene TMEM87A, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-207ENST00000564329 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
TMEM87A-207ENST00000564329 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
TMEM87A-207ENST00000564329 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
TMEM87A-207ENST00000564329 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
TMEM87A-207ENST00000564329 FOXD1Q16676 465 aa15.27■□□□□ 0.04
TMEM87A-207ENST00000564329 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
TMEM87A-207ENST00000564329 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
TMEM87A-207ENST00000564329 ADRA2BP18089 450 aa14.51□□□□□ -0.09
TMEM87A-207ENST00000564329 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
TMEM87A-207ENST00000564329 MSH5O43196 834 aa14.22□□□□□ -0.13
TMEM87A-207ENST00000564329 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
TMEM87A-207ENST00000564329 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
TMEM87A-207ENST00000564329 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
TMEM87A-207ENST00000564329 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
TMEM87A-207ENST00000564329 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
TMEM87A-207ENST00000564329 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
TMEM87A-207ENST00000564329 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
TMEM87A-207ENST00000564329 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
TMEM87A-207ENST00000564329 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
TMEM87A-207ENST00000564329 KCNA4P22459 653 aa12.8□□□□□ -0.36
TMEM87A-207ENST00000564329 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
TMEM87A-207ENST00000564329 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
TMEM87A-207ENST00000564329 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
TMEM87A-207ENST00000564329 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
TMEM87A-207ENST00000564329 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
TMEM87A-207ENST00000564329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
TMEM87A-207ENST00000564329 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
TMEM87A-207ENST00000564329 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
TMEM87A-207ENST00000564329 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
TMEM87A-207ENST00000564329 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
TMEM87A-207ENST00000564329 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
TMEM87A-207ENST00000564329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
TMEM87A-207ENST00000564329 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
TMEM87A-207ENST00000564329 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
TMEM87A-207ENST00000564329 APLP2Q06481 763 aa11.77□□□□□ -0.53
TMEM87A-207ENST00000564329 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
TMEM87A-207ENST00000564329 ZBTB22O15209 634 aa11.75□□□□□ -0.53
TMEM87A-207ENST00000564329 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
TMEM87A-207ENST00000564329 CAPN15O75808 1086 aa11.61□□□□□ -0.55
TMEM87A-207ENST00000564329 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
TMEM87A-207ENST00000564329 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
TMEM87A-207ENST00000564329 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
TMEM87A-207ENST00000564329 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
TMEM87A-207ENST00000564329 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
TMEM87A-207ENST00000564329 DSG3P32926 999 aa11.48□□□□□ -0.57
TMEM87A-207ENST00000564329 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
TMEM87A-207ENST00000564329 ABCB7O75027 752 aa11.32□□□□□ -0.6
TMEM87A-207ENST00000564329 POLA2Q14181 598 aa11.31□□□□□ -0.6
TMEM87A-207ENST00000564329 ZBTB12Q9Y330 459 aaPredicted RBP11.19□□□□□ -0.62
TMEM87A-207ENST00000564329 POTEHQ6S545 545 aa11.08□□□□□ -0.64
TMEM87A-207ENST00000564329 FBLN2P98095 1184 aa11.05□□□□□ -0.64
TMEM87A-207ENST00000564329 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
TMEM87A-207ENST00000564329 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
TMEM87A-207ENST00000564329 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
TMEM87A-207ENST00000564329 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
TMEM87A-207ENST00000564329 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
TMEM87A-207ENST00000564329 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
TMEM87A-207ENST00000564329 AKT1S1Q96B36 256 aa10.82□□□□□ -0.68
TMEM87A-207ENST00000564329 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
TMEM87A-207ENST00000564329 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
TMEM87A-207ENST00000564329 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
TMEM87A-207ENST00000564329 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
TMEM87A-207ENST00000564329 CHRDL2Q6WN34 429 aa10.62□□□□□ -0.71
TMEM87A-207ENST00000564329 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMEM87A-207ENST00000564329 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
TMEM87A-207ENST00000564329 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
TMEM87A-207ENST00000564329 PROM2Q8N271 834 aa10.49□□□□□ -0.73
TMEM87A-207ENST00000564329 FKBP8Q14318 412 aa10.47□□□□□ -0.73
TMEM87A-207ENST00000564329 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.73
TMEM87A-207ENST00000564329 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
TMEM87A-207ENST00000564329 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
TMEM87A-207ENST00000564329 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
TMEM87A-207ENST00000564329 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
TMEM87A-207ENST00000564329 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
TMEM87A-207ENST00000564329 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
TMEM87A-207ENST00000564329 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
TMEM87A-207ENST00000564329 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
TMEM87A-207ENST00000564329 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
TMEM87A-207ENST00000564329 HAX1O00165 279 aa10.17□□□□□ -0.78
TMEM87A-207ENST00000564329 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.78
TMEM87A-207ENST00000564329 PLEKHG5O94827 1062 aa10.14□□□□□ -0.79
TMEM87A-207ENST00000564329 EVX2Q03828 476 aa10.13□□□□□ -0.79
TMEM87A-207ENST00000564329 MIER1Q8N108 512 aa10.12□□□□□ -0.79
TMEM87A-207ENST00000564329 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
TMEM87A-207ENST00000564329 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
TMEM87A-207ENST00000564329 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
TMEM87A-207ENST00000564329 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
TMEM87A-207ENST00000564329 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
TMEM87A-207ENST00000564329 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
TMEM87A-207ENST00000564329 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
TMEM87A-207ENST00000564329 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
TMEM87A-207ENST00000564329 CLCN6P51797 869 aa9.91□□□□□ -0.82
TMEM87A-207ENST00000564329 KLHL34Q8N239 644 aa9.9□□□□□ -0.82
TMEM87A-207ENST00000564329 NUBP1P53384 320 aa9.88□□□□□ -0.83
TMEM87A-207ENST00000564329 IFNLR1Q8IU57 520 aaPredicted RBP9.88□□□□□ -0.83
TMEM87A-207ENST00000564329 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
TMEM87A-207ENST00000564329 ZNF579Q8NAF0 562 aaKnown RBP9.87□□□□□ -0.83
TMEM87A-207ENST00000564329 GABBR2O75899 941 aa9.84□□□□□ -0.83
TMEM87A-207ENST00000564329 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
TMEM87A-207ENST00000564329 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms