RNA–Protein interactions for RNA: ENST00000563433.1

USP10-209, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2

Gene USP10, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-209ENST00000563433 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
USP10-209ENST00000563433 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
USP10-209ENST00000563433 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
USP10-209ENST00000563433 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
USP10-209ENST00000563433 FOXD1Q16676 465 aa20.36■□□□□ 0.85
USP10-209ENST00000563433 MSH5O43196 834 aa19.1■□□□□ 0.65
USP10-209ENST00000563433 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
USP10-209ENST00000563433 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
USP10-209ENST00000563433 PIAS4Q8N2W9 510 aaPredicted RBP18.91■□□□□ 0.62
USP10-209ENST00000563433 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
USP10-209ENST00000563433 ADRA2BP18089 450 aa18.75■□□□□ 0.59
USP10-209ENST00000563433 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
USP10-209ENST00000563433 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
USP10-209ENST00000563433 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
USP10-209ENST00000563433 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
USP10-209ENST00000563433 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
USP10-209ENST00000563433 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
USP10-209ENST00000563433 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
USP10-209ENST00000563433 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
USP10-209ENST00000563433 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
USP10-209ENST00000563433 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
USP10-209ENST00000563433 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
USP10-209ENST00000563433 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
USP10-209ENST00000563433 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
USP10-209ENST00000563433 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
USP10-209ENST00000563433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.12e-11■■□□□ 14.4
USP10-209ENST00000563433 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
USP10-209ENST00000563433 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
USP10-209ENST00000563433 KCNA4P22459 653 aa15.21■□□□□ 0.03
USP10-209ENST00000563433 DSG3P32926 999 aa15.19■□□□□ 0.02
USP10-209ENST00000563433 CAPN15O75808 1086 aa15.14■□□□□ 0.01
USP10-209ENST00000563433 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
USP10-209ENST00000563433 POTEHQ6S545 545 aa14.89□□□□□ -0.03
USP10-209ENST00000563433 APLP2Q06481 763 aa14.85□□□□□ -0.03
USP10-209ENST00000563433 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
USP10-209ENST00000563433 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
USP10-209ENST00000563433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
USP10-209ENST00000563433 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
USP10-209ENST00000563433 ABCB7O75027 752 aa14.79□□□□□ -0.04
USP10-209ENST00000563433 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
USP10-209ENST00000563433 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
USP10-209ENST00000563433 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
USP10-209ENST00000563433 POLA2Q14181 598 aa14.42□□□□□ -0.1
USP10-209ENST00000563433 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
USP10-209ENST00000563433 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
USP10-209ENST00000563433 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
USP10-209ENST00000563433 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
USP10-209ENST00000563433 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
USP10-209ENST00000563433 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
USP10-209ENST00000563433 ZBTB22O15209 634 aa14.03□□□□□ -0.16
USP10-209ENST00000563433 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
USP10-209ENST00000563433 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
USP10-209ENST00000563433 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
USP10-209ENST00000563433 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
USP10-209ENST00000563433 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
USP10-209ENST00000563433 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
USP10-209ENST00000563433 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.214e-6■■■■□ 23.1
USP10-209ENST00000563433 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
USP10-209ENST00000563433 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
USP10-209ENST00000563433 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
USP10-209ENST00000563433 HAX1O00165 279 aa13.62□□□□□ -0.23
USP10-209ENST00000563433 FBLN2P98095 1184 aa13.62□□□□□ -0.23
USP10-209ENST00000563433 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
USP10-209ENST00000563433 EVX2Q03828 476 aa13.53□□□□□ -0.24
USP10-209ENST00000563433 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
USP10-209ENST00000563433 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
USP10-209ENST00000563433 PRKAR2AP13861 404 aaKnown RBP13.43□□□□□ -0.26
USP10-209ENST00000563433 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
USP10-209ENST00000563433 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
USP10-209ENST00000563433 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
USP10-209ENST00000563433 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP10-209ENST00000563433 CHADLQ6NUI6 762 aa13.23□□□□□ -0.29
USP10-209ENST00000563433 GABBR2O75899 941 aa13.18□□□□□ -0.3
USP10-209ENST00000563433 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
USP10-209ENST00000563433 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
USP10-209ENST00000563433 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
USP10-209ENST00000563433 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
USP10-209ENST00000563433 LHX8Q68G74 356 aa12.96□□□□□ -0.33
USP10-209ENST00000563433 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
USP10-209ENST00000563433 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
USP10-209ENST00000563433 CLCN6P51797 869 aa12.88□□□□□ -0.35
USP10-209ENST00000563433 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
USP10-209ENST00000563433 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
USP10-209ENST00000563433 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
USP10-209ENST00000563433 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
USP10-209ENST00000563433 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
USP10-209ENST00000563433 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
USP10-209ENST00000563433 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
USP10-209ENST00000563433 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
USP10-209ENST00000563433 PHF12Q96QT6 1004 aa12.59□□□□□ -0.39
USP10-209ENST00000563433 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
USP10-209ENST00000563433 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP10-209ENST00000563433 PROM2Q8N271 834 aa12.53□□□□□ -0.4
USP10-209ENST00000563433 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
USP10-209ENST00000563433 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
USP10-209ENST00000563433 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
USP10-209ENST00000563433 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
USP10-209ENST00000563433 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
USP10-209ENST00000563433 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
USP10-209ENST00000563433 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms