RNA–Protein interactions for RNA: ENST00000563095.5

LPCAT2-203, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 3

Gene LPCAT2, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-203ENST00000563095 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
LPCAT2-203ENST00000563095 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
LPCAT2-203ENST00000563095 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
LPCAT2-203ENST00000563095 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
LPCAT2-203ENST00000563095 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
LPCAT2-203ENST00000563095 FOXD1Q16676 465 aa20.97■□□□□ 0.95
LPCAT2-203ENST00000563095 ADRA2BP18089 450 aa20.26■□□□□ 0.83
LPCAT2-203ENST00000563095 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
LPCAT2-203ENST00000563095 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
LPCAT2-203ENST00000563095 MSH5O43196 834 aa19.3■□□□□ 0.68
LPCAT2-203ENST00000563095 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
LPCAT2-203ENST00000563095 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
LPCAT2-203ENST00000563095 KCNA4P22459 653 aa18.38■□□□□ 0.53
LPCAT2-203ENST00000563095 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
LPCAT2-203ENST00000563095 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
LPCAT2-203ENST00000563095 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
LPCAT2-203ENST00000563095 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
LPCAT2-203ENST00000563095 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
LPCAT2-203ENST00000563095 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
LPCAT2-203ENST00000563095 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
LPCAT2-203ENST00000563095 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
LPCAT2-203ENST00000563095 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
LPCAT2-203ENST00000563095 DCAF8L1A6NGE4 600 aa17.39■□□□□ 0.37
LPCAT2-203ENST00000563095 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
LPCAT2-203ENST00000563095 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
LPCAT2-203ENST00000563095 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
LPCAT2-203ENST00000563095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
LPCAT2-203ENST00000563095 ZBTB22O15209 634 aa16.89■□□□□ 0.29
LPCAT2-203ENST00000563095 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
LPCAT2-203ENST00000563095 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
LPCAT2-203ENST00000563095 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
LPCAT2-203ENST00000563095 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
LPCAT2-203ENST00000563095 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
LPCAT2-203ENST00000563095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
LPCAT2-203ENST00000563095 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
LPCAT2-203ENST00000563095 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
LPCAT2-203ENST00000563095 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
LPCAT2-203ENST00000563095 APLP2Q06481 763 aa16.26■□□□□ 0.19
LPCAT2-203ENST00000563095 ATXN8OSP0DMR3 200 aa16.25■□□□□ 0.19
LPCAT2-203ENST00000563095 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
LPCAT2-203ENST00000563095 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
LPCAT2-203ENST00000563095 CAPN15O75808 1086 aa16.14■□□□□ 0.17
LPCAT2-203ENST00000563095 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
LPCAT2-203ENST00000563095 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
LPCAT2-203ENST00000563095 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
LPCAT2-203ENST00000563095 ABCB7O75027 752 aa15.84■□□□□ 0.13
LPCAT2-203ENST00000563095 POLA2Q14181 598 aa15.8■□□□□ 0.12
LPCAT2-203ENST00000563095 DSG3P32926 999 aa15.76■□□□□ 0.11
LPCAT2-203ENST00000563095 FBLN2P98095 1184 aa15.53■□□□□ 0.08
LPCAT2-203ENST00000563095 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
LPCAT2-203ENST00000563095 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
LPCAT2-203ENST00000563095 FKBP8Q14318 412 aa15.29■□□□□ 0.04
LPCAT2-203ENST00000563095 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
LPCAT2-203ENST00000563095 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
LPCAT2-203ENST00000563095 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
LPCAT2-203ENST00000563095 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
LPCAT2-203ENST00000563095 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
LPCAT2-203ENST00000563095 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
LPCAT2-203ENST00000563095 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
LPCAT2-203ENST00000563095 SSUH2Q9Y2M2 353 aa14.95□□□□□ -0.02
LPCAT2-203ENST00000563095 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
LPCAT2-203ENST00000563095 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
LPCAT2-203ENST00000563095 PROM2Q8N271 834 aa14.84□□□□□ -0.03
LPCAT2-203ENST00000563095 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
LPCAT2-203ENST00000563095 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
LPCAT2-203ENST00000563095 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
LPCAT2-203ENST00000563095 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
LPCAT2-203ENST00000563095 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
LPCAT2-203ENST00000563095 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
LPCAT2-203ENST00000563095 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
LPCAT2-203ENST00000563095 VASPP50552 380 aaPredicted RBP14.5□□□□□ -0.09
LPCAT2-203ENST00000563095 MIER1Q8N108 512 aa14.44□□□□□ -0.1
LPCAT2-203ENST00000563095 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
LPCAT2-203ENST00000563095 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
LPCAT2-203ENST00000563095 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
LPCAT2-203ENST00000563095 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
LPCAT2-203ENST00000563095 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
LPCAT2-203ENST00000563095 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
LPCAT2-203ENST00000563095 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
LPCAT2-203ENST00000563095 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
LPCAT2-203ENST00000563095 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
LPCAT2-203ENST00000563095 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
LPCAT2-203ENST00000563095 POTEHQ6S545 545 aa14.22□□□□□ -0.13
LPCAT2-203ENST00000563095 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
LPCAT2-203ENST00000563095 SPOCK2Q92563 424 aa14.13□□□□□ -0.15
LPCAT2-203ENST00000563095 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
LPCAT2-203ENST00000563095 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
LPCAT2-203ENST00000563095 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
LPCAT2-203ENST00000563095 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
LPCAT2-203ENST00000563095 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
LPCAT2-203ENST00000563095 NUBP1P53384 320 aa13.97□□□□□ -0.17
LPCAT2-203ENST00000563095 CIZ1Q9ULV3 898 aaPredicted RBP13.96□□□□□ -0.17
LPCAT2-203ENST00000563095 DCAF8Q5TAQ9 597 aa13.93□□□□□ -0.18
LPCAT2-203ENST00000563095 RASEFQ8IZ41 740 aa13.93□□□□□ -0.18
LPCAT2-203ENST00000563095 FAM212AQ96EL1 285 aa13.92□□□□□ -0.18
LPCAT2-203ENST00000563095 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
LPCAT2-203ENST00000563095 GSE1Q14687 1217 aa13.87□□□□□ -0.19
LPCAT2-203ENST00000563095 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
LPCAT2-203ENST00000563095 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
LPCAT2-203ENST00000563095 PKD2Q13563 968 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms