RNA–Protein interactions for RNA: ENST00000562847.5

TCF4-217, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-217ENST00000562847 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
TCF4-217ENST00000562847 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
TCF4-217ENST00000562847 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
TCF4-217ENST00000562847 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
TCF4-217ENST00000562847 FOXD1Q16676 465 aa19.28■□□□□ 0.68
TCF4-217ENST00000562847 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
TCF4-217ENST00000562847 ADRA2BP18089 450 aa18.19■□□□□ 0.5
TCF4-217ENST00000562847 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
TCF4-217ENST00000562847 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
TCF4-217ENST00000562847 MSH5O43196 834 aa18.05■□□□□ 0.48
TCF4-217ENST00000562847 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
TCF4-217ENST00000562847 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
TCF4-217ENST00000562847 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
TCF4-217ENST00000562847 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
TCF4-217ENST00000562847 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
TCF4-217ENST00000562847 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
TCF4-217ENST00000562847 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
TCF4-217ENST00000562847 KCNA4P22459 653 aa16.15■□□□□ 0.18
TCF4-217ENST00000562847 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
TCF4-217ENST00000562847 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
TCF4-217ENST00000562847 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
TCF4-217ENST00000562847 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
TCF4-217ENST00000562847 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
TCF4-217ENST00000562847 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
TCF4-217ENST00000562847 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
TCF4-217ENST00000562847 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
TCF4-217ENST00000562847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
TCF4-217ENST00000562847 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
TCF4-217ENST00000562847 SLC4A2P04920 1241 aa15.07■□□□□ 0
TCF4-217ENST00000562847 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
TCF4-217ENST00000562847 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
TCF4-217ENST00000562847 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
TCF4-217ENST00000562847 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
TCF4-217ENST00000562847 ZBTB22O15209 634 aa14.79□□□□□ -0.04
TCF4-217ENST00000562847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
TCF4-217ENST00000562847 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
TCF4-217ENST00000562847 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
TCF4-217ENST00000562847 APLP2Q06481 763 aa14.7□□□□□ -0.06
TCF4-217ENST00000562847 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
TCF4-217ENST00000562847 CAPN15O75808 1086 aa14.62□□□□□ -0.07
TCF4-217ENST00000562847 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
TCF4-217ENST00000562847 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
TCF4-217ENST00000562847 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
TCF4-217ENST00000562847 DSG3P32926 999 aa14.46□□□□□ -0.09
TCF4-217ENST00000562847 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
TCF4-217ENST00000562847 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
TCF4-217ENST00000562847 ABCB7O75027 752 aa14.29□□□□□ -0.12
TCF4-217ENST00000562847 POLA2Q14181 598 aa14.19□□□□□ -0.14
TCF4-217ENST00000562847 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
TCF4-217ENST00000562847 FBLN2P98095 1184 aa13.9□□□□□ -0.18
TCF4-217ENST00000562847 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
TCF4-217ENST00000562847 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
TCF4-217ENST00000562847 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
TCF4-217ENST00000562847 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
TCF4-217ENST00000562847 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
TCF4-217ENST00000562847 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
TCF4-217ENST00000562847 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
TCF4-217ENST00000562847 POTEHQ6S545 545 aa13.51□□□□□ -0.25
TCF4-217ENST00000562847 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
TCF4-217ENST00000562847 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
TCF4-217ENST00000562847 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
TCF4-217ENST00000562847 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
TCF4-217ENST00000562847 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
TCF4-217ENST00000562847 FKBP8Q14318 412 aa13.34□□□□□ -0.27
TCF4-217ENST00000562847 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
TCF4-217ENST00000562847 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
TCF4-217ENST00000562847 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
TCF4-217ENST00000562847 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
TCF4-217ENST00000562847 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
TCF4-217ENST00000562847 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
TCF4-217ENST00000562847 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
TCF4-217ENST00000562847 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
TCF4-217ENST00000562847 PROM2Q8N271 834 aa13.05□□□□□ -0.32
TCF4-217ENST00000562847 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
TCF4-217ENST00000562847 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
TCF4-217ENST00000562847 HAX1O00165 279 aa12.87□□□□□ -0.35
TCF4-217ENST00000562847 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
TCF4-217ENST00000562847 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
TCF4-217ENST00000562847 MIER1Q8N108 512 aa12.81□□□□□ -0.36
TCF4-217ENST00000562847 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
TCF4-217ENST00000562847 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
TCF4-217ENST00000562847 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
TCF4-217ENST00000562847 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
TCF4-217ENST00000562847 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
TCF4-217ENST00000562847 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
TCF4-217ENST00000562847 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
TCF4-217ENST00000562847 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
TCF4-217ENST00000562847 EVX2Q03828 476 aa12.63□□□□□ -0.39
TCF4-217ENST00000562847 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
TCF4-217ENST00000562847 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
TCF4-217ENST00000562847 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
TCF4-217ENST00000562847 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
TCF4-217ENST00000562847 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
TCF4-217ENST00000562847 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
TCF4-217ENST00000562847 GABBR2O75899 941 aa12.43□□□□□ -0.42
TCF4-217ENST00000562847 CLCN6P51797 869 aa12.43□□□□□ -0.42
TCF4-217ENST00000562847 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
TCF4-217ENST00000562847 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
TCF4-217ENST00000562847 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
TCF4-217ENST00000562847 NUBP1P53384 320 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms