RNA–Protein interactions for RNA: ENST00000562571.1

LRRC9-204, Transcript of leucine rich repeat containing 9, humanhuman

TSL 3

Gene LRRC9, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-204ENST00000562571 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
LRRC9-204ENST00000562571 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
LRRC9-204ENST00000562571 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
LRRC9-204ENST00000562571 PHF23Q9BUL5 403 aaPredicted RBP24.71■■□□□ 1.55
LRRC9-204ENST00000562571 FOXD1Q16676 465 aa23.27■■□□□ 1.32
LRRC9-204ENST00000562571 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
LRRC9-204ENST00000562571 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
LRRC9-204ENST00000562571 MSH5O43196 834 aa21.8■■□□□ 1.08
LRRC9-204ENST00000562571 ADRA2BP18089 450 aa21.79■■□□□ 1.08
LRRC9-204ENST00000562571 PIAS4Q8N2W9 510 aaPredicted RBP21.79■■□□□ 1.08
LRRC9-204ENST00000562571 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
LRRC9-204ENST00000562571 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.81
LRRC9-204ENST00000562571 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
LRRC9-204ENST00000562571 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
LRRC9-204ENST00000562571 PPP4R3CPQ6ZMV5 832 aa19.72■□□□□ 0.75
LRRC9-204ENST00000562571 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
LRRC9-204ENST00000562571 HOXD11P31277 338 aaPredicted RBP19.24■□□□□ 0.67
LRRC9-204ENST00000562571 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
LRRC9-204ENST00000562571 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
LRRC9-204ENST00000562571 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
LRRC9-204ENST00000562571 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
LRRC9-204ENST00000562571 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
LRRC9-204ENST00000562571 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
LRRC9-204ENST00000562571 CACNB1Q02641 598 aaPredicted RBP18.53■□□□□ 0.56
LRRC9-204ENST00000562571 KCNA4P22459 653 aa18.49■□□□□ 0.55
LRRC9-204ENST00000562571 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
LRRC9-204ENST00000562571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
LRRC9-204ENST00000562571 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
LRRC9-204ENST00000562571 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
LRRC9-204ENST00000562571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
LRRC9-204ENST00000562571 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
LRRC9-204ENST00000562571 APLP2Q06481 763 aa17.56■□□□□ 0.4
LRRC9-204ENST00000562571 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
LRRC9-204ENST00000562571 CAPN15O75808 1086 aa17.55■□□□□ 0.4
LRRC9-204ENST00000562571 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
LRRC9-204ENST00000562571 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
LRRC9-204ENST00000562571 DSG3P32926 999 aa17.44■□□□□ 0.38
LRRC9-204ENST00000562571 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
LRRC9-204ENST00000562571 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
LRRC9-204ENST00000562571 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
LRRC9-204ENST00000562571 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
LRRC9-204ENST00000562571 ABCB7O75027 752 aa17.12■□□□□ 0.33
LRRC9-204ENST00000562571 ZBTB22O15209 634 aa16.98■□□□□ 0.31
LRRC9-204ENST00000562571 POLA2Q14181 598 aa16.91■□□□□ 0.3
LRRC9-204ENST00000562571 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
LRRC9-204ENST00000562571 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
LRRC9-204ENST00000562571 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
LRRC9-204ENST00000562571 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
LRRC9-204ENST00000562571 POTEHQ6S545 545 aa16.43■□□□□ 0.22
LRRC9-204ENST00000562571 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
LRRC9-204ENST00000562571 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
LRRC9-204ENST00000562571 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
LRRC9-204ENST00000562571 FBLN2P98095 1184 aa16.29■□□□□ 0.2
LRRC9-204ENST00000562571 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
LRRC9-204ENST00000562571 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
LRRC9-204ENST00000562571 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
LRRC9-204ENST00000562571 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
LRRC9-204ENST00000562571 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
LRRC9-204ENST00000562571 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
LRRC9-204ENST00000562571 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
LRRC9-204ENST00000562571 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
LRRC9-204ENST00000562571 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
LRRC9-204ENST00000562571 SSUH2Q9Y2M2 353 aa15.91■□□□□ 0.14
LRRC9-204ENST00000562571 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
LRRC9-204ENST00000562571 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
LRRC9-204ENST00000562571 SPDYE1Q8NFV5 336 aaPredicted RBP15.81■□□□□ 0.12
LRRC9-204ENST00000562571 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
LRRC9-204ENST00000562571 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
LRRC9-204ENST00000562571 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
LRRC9-204ENST00000562571 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
LRRC9-204ENST00000562571 HAX1O00165 279 aa15.5■□□□□ 0.07
LRRC9-204ENST00000562571 SP7Q8TDD2 431 aaPredicted RBP15.5■□□□□ 0.07
LRRC9-204ENST00000562571 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
LRRC9-204ENST00000562571 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
LRRC9-204ENST00000562571 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
LRRC9-204ENST00000562571 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
LRRC9-204ENST00000562571 EVX2Q03828 476 aa15.27■□□□□ 0.04
LRRC9-204ENST00000562571 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
LRRC9-204ENST00000562571 PROM2Q8N271 834 aa15.17■□□□□ 0.02
LRRC9-204ENST00000562571 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
LRRC9-204ENST00000562571 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
LRRC9-204ENST00000562571 GABBR2O75899 941 aa15□□□□□ -0.01
LRRC9-204ENST00000562571 CLCN6P51797 869 aa14.98□□□□□ -0.01
LRRC9-204ENST00000562571 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
LRRC9-204ENST00000562571 MNX1P50219 401 aaPredicted RBP14.91□□□□□ -0.02
LRRC9-204ENST00000562571 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
LRRC9-204ENST00000562571 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
LRRC9-204ENST00000562571 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
LRRC9-204ENST00000562571 FKBP8Q14318 412 aa14.83□□□□□ -0.04
LRRC9-204ENST00000562571 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
LRRC9-204ENST00000562571 MIER1Q8N108 512 aa14.75□□□□□ -0.05
LRRC9-204ENST00000562571 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
LRRC9-204ENST00000562571 DCBLD2Q96PD2 775 aa14.65□□□□□ -0.06
LRRC9-204ENST00000562571 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
LRRC9-204ENST00000562571 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
LRRC9-204ENST00000562571 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
LRRC9-204ENST00000562571 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
LRRC9-204ENST00000562571 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
LRRC9-204ENST00000562571 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
LRRC9-204ENST00000562571 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms