RNA–Protein interactions for RNA: ENST00000561888.1

CCP110-204, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-204ENST00000561888 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
CCP110-204ENST00000561888 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
CCP110-204ENST00000561888 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
CCP110-204ENST00000561888 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
CCP110-204ENST00000561888 FOXD1Q16676 465 aa15.29■□□□□ 0.04
CCP110-204ENST00000561888 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
CCP110-204ENST00000561888 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
CCP110-204ENST00000561888 MSH5O43196 834 aa14.32□□□□□ -0.12
CCP110-204ENST00000561888 ADRA2BP18089 450 aa14.29□□□□□ -0.12
CCP110-204ENST00000561888 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
CCP110-204ENST00000561888 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
CCP110-204ENST00000561888 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
CCP110-204ENST00000561888 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
CCP110-204ENST00000561888 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
CCP110-204ENST00000561888 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
CCP110-204ENST00000561888 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
CCP110-204ENST00000561888 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
CCP110-204ENST00000561888 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
CCP110-204ENST00000561888 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
CCP110-204ENST00000561888 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
CCP110-204ENST00000561888 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
CCP110-204ENST00000561888 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
CCP110-204ENST00000561888 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
CCP110-204ENST00000561888 DNAJC5BQ9UF47 199 aa12.21□□□□□ -0.45
CCP110-204ENST00000561888 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
CCP110-204ENST00000561888 KCNA4P22459 653 aa12.02□□□□□ -0.49
CCP110-204ENST00000561888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCP110-204ENST00000561888 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
CCP110-204ENST00000561888 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
CCP110-204ENST00000561888 CAPN15O75808 1086 aa11.52□□□□□ -0.57
CCP110-204ENST00000561888 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
CCP110-204ENST00000561888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
CCP110-204ENST00000561888 APLP2Q06481 763 aa11.47□□□□□ -0.57
CCP110-204ENST00000561888 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
CCP110-204ENST00000561888 DSG3P32926 999 aa11.45□□□□□ -0.58
CCP110-204ENST00000561888 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
CCP110-204ENST00000561888 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
CCP110-204ENST00000561888 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
CCP110-204ENST00000561888 TRHP20396 242 aaPredicted RBP11.34□□□□□ -0.59
CCP110-204ENST00000561888 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
CCP110-204ENST00000561888 ABCB7O75027 752 aa11.22□□□□□ -0.61
CCP110-204ENST00000561888 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
CCP110-204ENST00000561888 POLA2Q14181 598 aa11.07□□□□□ -0.64
CCP110-204ENST00000561888 ZBTB22O15209 634 aa11.04□□□□□ -0.64
CCP110-204ENST00000561888 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.65
CCP110-204ENST00000561888 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CCP110-204ENST00000561888 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
CCP110-204ENST00000561888 ZBTB12Q9Y330 459 aaPredicted RBP10.88□□□□□ -0.67
CCP110-204ENST00000561888 POTEHQ6S545 545 aa10.85□□□□□ -0.67
CCP110-204ENST00000561888 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
CCP110-204ENST00000561888 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
CCP110-204ENST00000561888 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
CCP110-204ENST00000561888 FBLN2P98095 1184 aa10.63□□□□□ -0.71
CCP110-204ENST00000561888 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
CCP110-204ENST00000561888 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
CCP110-204ENST00000561888 SPDYE2BA6NHP3 402 aa10.54□□□□□ -0.72
CCP110-204ENST00000561888 SPDYE6P0CI01 402 aa10.54□□□□□ -0.72
CCP110-204ENST00000561888 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
CCP110-204ENST00000561888 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
CCP110-204ENST00000561888 EHMT2Q96KQ7 1210 aa10.47□□□□□ -0.73
CCP110-204ENST00000561888 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
CCP110-204ENST00000561888 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
CCP110-204ENST00000561888 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
CCP110-204ENST00000561888 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
CCP110-204ENST00000561888 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCP110-204ENST00000561888 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
CCP110-204ENST00000561888 CLEC11AQ9Y240 323 aa10.28□□□□□ -0.76
CCP110-204ENST00000561888 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCP110-204ENST00000561888 HAX1O00165 279 aa10.21□□□□□ -0.77
CCP110-204ENST00000561888 SP7Q8TDD2 431 aaPredicted RBP10.21□□□□□ -0.77
CCP110-204ENST00000561888 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
CCP110-204ENST00000561888 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
CCP110-204ENST00000561888 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
CCP110-204ENST00000561888 EVX2Q03828 476 aa10.06□□□□□ -0.8
CCP110-204ENST00000561888 CHADLQ6NUI6 762 aa10.06□□□□□ -0.8
CCP110-204ENST00000561888 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
CCP110-204ENST00000561888 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
CCP110-204ENST00000561888 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
CCP110-204ENST00000561888 CREBZFQ9NS37 354 aa9.9□□□□□ -0.82
CCP110-204ENST00000561888 GABBR2O75899 941 aa9.87□□□□□ -0.83
CCP110-204ENST00000561888 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
CCP110-204ENST00000561888 PROM2Q8N271 834 aa9.86□□□□□ -0.83
CCP110-204ENST00000561888 CLCN6P51797 869 aa9.82□□□□□ -0.84
CCP110-204ENST00000561888 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCP110-204ENST00000561888 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
CCP110-204ENST00000561888 ZNF579Q8NAF0 562 aaKnown RBP9.74□□□□□ -0.85
CCP110-204ENST00000561888 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
CCP110-204ENST00000561888 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
CCP110-204ENST00000561888 POTEIP0CG38 1075 aa9.64□□□□□ -0.87
CCP110-204ENST00000561888 PLEKHG5O94827 1062 aa9.62□□□□□ -0.87
CCP110-204ENST00000561888 MIER1Q8N108 512 aa9.62□□□□□ -0.87
CCP110-204ENST00000561888 DCBLD2Q96PD2 775 aa9.62□□□□□ -0.87
CCP110-204ENST00000561888 FKBP8Q14318 412 aa9.61□□□□□ -0.87
CCP110-204ENST00000561888 PHF12Q96QT6 1004 aa9.59□□□□□ -0.87
CCP110-204ENST00000561888 GALR2O43603 387 aaPredicted RBP9.58□□□□□ -0.88
CCP110-204ENST00000561888 LHX8Q68G74 356 aa9.58□□□□□ -0.88
CCP110-204ENST00000561888 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
CCP110-204ENST00000561888 TSPYL2Q9H2G4 693 aaPredicted RBP9.53□□□□□ -0.88
CCP110-204ENST00000561888 CCDC61Q9Y6R9 512 aa9.51□□□□□ -0.89
CCP110-204ENST00000561888 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms