RNA–Protein interactions for RNA: ENST00000561265.1

TRIP4-212, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 1,039 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-212ENST00000561265 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
TRIP4-212ENST00000561265 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
TRIP4-212ENST00000561265 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
TRIP4-212ENST00000561265 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
TRIP4-212ENST00000561265 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
TRIP4-212ENST00000561265 FOXD1Q16676 465 aa19.29■□□□□ 0.68
TRIP4-212ENST00000561265 ADRA2BP18089 450 aa18.67■□□□□ 0.58
TRIP4-212ENST00000561265 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
TRIP4-212ENST00000561265 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
TRIP4-212ENST00000561265 MSH5O43196 834 aa17.84■□□□□ 0.45
TRIP4-212ENST00000561265 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
TRIP4-212ENST00000561265 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
TRIP4-212ENST00000561265 KCNA4P22459 653 aa17.09■□□□□ 0.33
TRIP4-212ENST00000561265 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
TRIP4-212ENST00000561265 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
TRIP4-212ENST00000561265 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
TRIP4-212ENST00000561265 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
TRIP4-212ENST00000561265 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
TRIP4-212ENST00000561265 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
TRIP4-212ENST00000561265 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
TRIP4-212ENST00000561265 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
TRIP4-212ENST00000561265 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
TRIP4-212ENST00000561265 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
TRIP4-212ENST00000561265 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
TRIP4-212ENST00000561265 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
TRIP4-212ENST00000561265 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
TRIP4-212ENST00000561265 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
TRIP4-212ENST00000561265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRIP4-212ENST00000561265 ZBTB22O15209 634 aa15.67■□□□□ 0.1
TRIP4-212ENST00000561265 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
TRIP4-212ENST00000561265 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
TRIP4-212ENST00000561265 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
TRIP4-212ENST00000561265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
TRIP4-212ENST00000561265 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
TRIP4-212ENST00000561265 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
TRIP4-212ENST00000561265 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
TRIP4-212ENST00000561265 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
TRIP4-212ENST00000561265 APLP2Q06481 763 aa15.19■□□□□ 0.02
TRIP4-212ENST00000561265 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
TRIP4-212ENST00000561265 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
TRIP4-212ENST00000561265 CAPN15O75808 1086 aa14.9□□□□□ -0.02
TRIP4-212ENST00000561265 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
TRIP4-212ENST00000561265 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
TRIP4-212ENST00000561265 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
TRIP4-212ENST00000561265 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
TRIP4-212ENST00000561265 POLA2Q14181 598 aa14.62□□□□□ -0.07
TRIP4-212ENST00000561265 ABCB7O75027 752 aa14.59□□□□□ -0.07
TRIP4-212ENST00000561265 DSG3P32926 999 aa14.54□□□□□ -0.08
TRIP4-212ENST00000561265 FBLN2P98095 1184 aa14.47□□□□□ -0.09
TRIP4-212ENST00000561265 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
TRIP4-212ENST00000561265 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
TRIP4-212ENST00000561265 FKBP8Q14318 412 aa14.3□□□□□ -0.12
TRIP4-212ENST00000561265 SPDYE4A6NLX3 237 aa14.15□□□□□ -0.14
TRIP4-212ENST00000561265 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
TRIP4-212ENST00000561265 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
TRIP4-212ENST00000561265 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
TRIP4-212ENST00000561265 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
TRIP4-212ENST00000561265 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
TRIP4-212ENST00000561265 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
TRIP4-212ENST00000561265 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
TRIP4-212ENST00000561265 PROM2Q8N271 834 aa13.85□□□□□ -0.19
TRIP4-212ENST00000561265 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
TRIP4-212ENST00000561265 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIP4-212ENST00000561265 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
TRIP4-212ENST00000561265 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
TRIP4-212ENST00000561265 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
TRIP4-212ENST00000561265 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
TRIP4-212ENST00000561265 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
TRIP4-212ENST00000561265 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
TRIP4-212ENST00000561265 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
TRIP4-212ENST00000561265 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
TRIP4-212ENST00000561265 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
TRIP4-212ENST00000561265 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
TRIP4-212ENST00000561265 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
TRIP4-212ENST00000561265 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
TRIP4-212ENST00000561265 MIER1Q8N108 512 aa13.44□□□□□ -0.26
TRIP4-212ENST00000561265 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
TRIP4-212ENST00000561265 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
TRIP4-212ENST00000561265 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
TRIP4-212ENST00000561265 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
TRIP4-212ENST00000561265 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
TRIP4-212ENST00000561265 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
TRIP4-212ENST00000561265 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIP4-212ENST00000561265 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
TRIP4-212ENST00000561265 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIP4-212ENST00000561265 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
TRIP4-212ENST00000561265 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
TRIP4-212ENST00000561265 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
TRIP4-212ENST00000561265 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
TRIP4-212ENST00000561265 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
TRIP4-212ENST00000561265 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
TRIP4-212ENST00000561265 NUBP1P53384 320 aa12.99□□□□□ -0.33
TRIP4-212ENST00000561265 GSE1Q14687 1217 aa12.99□□□□□ -0.33
TRIP4-212ENST00000561265 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
TRIP4-212ENST00000561265 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
TRIP4-212ENST00000561265 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
TRIP4-212ENST00000561265 PKD2Q13563 968 aa12.92□□□□□ -0.34
TRIP4-212ENST00000561265 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
TRIP4-212ENST00000561265 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
TRIP4-212ENST00000561265 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms