RNA–Protein interactions for RNA: ENST00000561164.1

MARK3-224, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-224ENST00000561164 AEBP2Q6ZN18 517 aaPredicted RBP27.87■■■□□ 2.05
MARK3-224ENST00000561164 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
MARK3-224ENST00000561164 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
MARK3-224ENST00000561164 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
MARK3-224ENST00000561164 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
MARK3-224ENST00000561164 FOXD1Q16676 465 aa21.85■■□□□ 1.09
MARK3-224ENST00000561164 ADRA2BP18089 450 aa21.34■■□□□ 1.01
MARK3-224ENST00000561164 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
MARK3-224ENST00000561164 PIAS4Q8N2W9 510 aaPredicted RBP20.74■□□□□ 0.91
MARK3-224ENST00000561164 MSH5O43196 834 aa20.03■□□□□ 0.8
MARK3-224ENST00000561164 PPP4R3CPQ6ZMV5 832 aa19.96■□□□□ 0.79
MARK3-224ENST00000561164 KCNA4P22459 653 aa19.92■□□□□ 0.78
MARK3-224ENST00000561164 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
MARK3-224ENST00000561164 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
MARK3-224ENST00000561164 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
MARK3-224ENST00000561164 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
MARK3-224ENST00000561164 MAPK8IP2Q13387 824 aaPredicted RBP19.24■□□□□ 0.67
MARK3-224ENST00000561164 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
MARK3-224ENST00000561164 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
MARK3-224ENST00000561164 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
MARK3-224ENST00000561164 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
MARK3-224ENST00000561164 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
MARK3-224ENST00000561164 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
MARK3-224ENST00000561164 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
MARK3-224ENST00000561164 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
MARK3-224ENST00000561164 ZBTB22O15209 634 aa18.32■□□□□ 0.52
MARK3-224ENST00000561164 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
MARK3-224ENST00000561164 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
MARK3-224ENST00000561164 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
MARK3-224ENST00000561164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■■■□□ 15.9
MARK3-224ENST00000561164 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
MARK3-224ENST00000561164 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
MARK3-224ENST00000561164 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
MARK3-224ENST00000561164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
MARK3-224ENST00000561164 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
MARK3-224ENST00000561164 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
MARK3-224ENST00000561164 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
MARK3-224ENST00000561164 APLP2Q06481 763 aa17.23■□□□□ 0.35
MARK3-224ENST00000561164 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
MARK3-224ENST00000561164 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
MARK3-224ENST00000561164 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
MARK3-224ENST00000561164 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
MARK3-224ENST00000561164 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
MARK3-224ENST00000561164 CAPN15O75808 1086 aa16.88■□□□□ 0.29
MARK3-224ENST00000561164 FKBP8Q14318 412 aa16.77■□□□□ 0.28
MARK3-224ENST00000561164 POLA2Q14181 598 aa16.69■□□□□ 0.26
MARK3-224ENST00000561164 ABCB7O75027 752 aa16.59■□□□□ 0.25
MARK3-224ENST00000561164 FBLN2P98095 1184 aa16.57■□□□□ 0.24
MARK3-224ENST00000561164 MKRN4PQ13434 485 aaPredicted RBP16.53■□□□□ 0.24
MARK3-224ENST00000561164 DSG3P32926 999 aa16.49■□□□□ 0.23
MARK3-224ENST00000561164 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
MARK3-224ENST00000561164 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
MARK3-224ENST00000561164 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
MARK3-224ENST00000561164 PROM2Q8N271 834 aa16.13■□□□□ 0.17
MARK3-224ENST00000561164 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
MARK3-224ENST00000561164 FBXO3Q9UK99 471 aa16.08■□□□□ 0.16
MARK3-224ENST00000561164 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
MARK3-224ENST00000561164 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
MARK3-224ENST00000561164 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
MARK3-224ENST00000561164 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
MARK3-224ENST00000561164 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
MARK3-224ENST00000561164 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
MARK3-224ENST00000561164 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
MARK3-224ENST00000561164 VASPP50552 380 aaPredicted RBP15.84■□□□□ 0.13
MARK3-224ENST00000561164 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
MARK3-224ENST00000561164 RBM42Q9BTD8 480 aaKnown RBP15.73■□□□□ 0.11
MARK3-224ENST00000561164 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
MARK3-224ENST00000561164 IFNLR1Q8IU57 520 aaPredicted RBP15.62■□□□□ 0.09
MARK3-224ENST00000561164 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
MARK3-224ENST00000561164 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
MARK3-224ENST00000561164 MIER1Q8N108 512 aa15.49■□□□□ 0.07
MARK3-224ENST00000561164 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
MARK3-224ENST00000561164 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
MARK3-224ENST00000561164 REM2Q8IYK8 340 aaPredicted RBP15.45■□□□□ 0.06
MARK3-224ENST00000561164 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
MARK3-224ENST00000561164 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
MARK3-224ENST00000561164 SPOCK2Q92563 424 aa15.4■□□□□ 0.06
MARK3-224ENST00000561164 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
MARK3-224ENST00000561164 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
MARK3-224ENST00000561164 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
MARK3-224ENST00000561164 PKD2Q13563 968 aa15.24■□□□□ 0.03
MARK3-224ENST00000561164 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
MARK3-224ENST00000561164 ECM2O94769 699 aaPredicted RBP15.11■□□□□ 0.01
MARK3-224ENST00000561164 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
MARK3-224ENST00000561164 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
MARK3-224ENST00000561164 MNX1P50219 401 aaPredicted RBP15.05■□□□□ -0
MARK3-224ENST00000561164 NUBP1P53384 320 aa15.04■□□□□ -0
MARK3-224ENST00000561164 GSE1Q14687 1217 aa15.01□□□□□ -0.01
MARK3-224ENST00000561164 SLC24A1O60721 1099 aa14.99□□□□□ -0.01
MARK3-224ENST00000561164 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
MARK3-224ENST00000561164 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
MARK3-224ENST00000561164 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
MARK3-224ENST00000561164 DCAF8Q5TAQ9 597 aa14.96□□□□□ -0.01
MARK3-224ENST00000561164 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
MARK3-224ENST00000561164 RGL2O15211 777 aa14.94□□□□□ -0.02
MARK3-224ENST00000561164 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
MARK3-224ENST00000561164 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
MARK3-224ENST00000561164 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
MARK3-224ENST00000561164 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
MARK3-224ENST00000561164 FARP1Q9Y4F1 1045 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms