RNA–Protein interactions for RNA: ENST00000561093.1

RORA-214, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 642 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-214ENST00000561093 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
RORA-214ENST00000561093 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
RORA-214ENST00000561093 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
RORA-214ENST00000561093 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
RORA-214ENST00000561093 FOXD1Q16676 465 aa17.54■□□□□ 0.4
RORA-214ENST00000561093 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
RORA-214ENST00000561093 MSH5O43196 834 aa16.48■□□□□ 0.23
RORA-214ENST00000561093 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
RORA-214ENST00000561093 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
RORA-214ENST00000561093 ADRA2BP18089 450 aa16.28■□□□□ 0.2
RORA-214ENST00000561093 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
RORA-214ENST00000561093 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
RORA-214ENST00000561093 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
RORA-214ENST00000561093 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
RORA-214ENST00000561093 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
RORA-214ENST00000561093 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
RORA-214ENST00000561093 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
RORA-214ENST00000561093 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
RORA-214ENST00000561093 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
RORA-214ENST00000561093 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
RORA-214ENST00000561093 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
RORA-214ENST00000561093 RNF39Q9H2S5 420 aa14.03□□□□□ -0.16
RORA-214ENST00000561093 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
RORA-214ENST00000561093 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
RORA-214ENST00000561093 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
RORA-214ENST00000561093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
RORA-214ENST00000561093 KCNA4P22459 653 aa13.49□□□□□ -0.25
RORA-214ENST00000561093 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
RORA-214ENST00000561093 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
RORA-214ENST00000561093 CAPN15O75808 1086 aa13.17□□□□□ -0.3
RORA-214ENST00000561093 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
RORA-214ENST00000561093 DSG3P32926 999 aa13.12□□□□□ -0.31
RORA-214ENST00000561093 APLP2Q06481 763 aa13.05□□□□□ -0.32
RORA-214ENST00000561093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
RORA-214ENST00000561093 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
RORA-214ENST00000561093 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
RORA-214ENST00000561093 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
RORA-214ENST00000561093 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
RORA-214ENST00000561093 ABCB7O75027 752 aa12.83□□□□□ -0.36
RORA-214ENST00000561093 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
RORA-214ENST00000561093 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
RORA-214ENST00000561093 POTEHQ6S545 545 aa12.64□□□□□ -0.39
RORA-214ENST00000561093 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
RORA-214ENST00000561093 POLA2Q14181 598 aa12.6□□□□□ -0.39
RORA-214ENST00000561093 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
RORA-214ENST00000561093 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
RORA-214ENST00000561093 ZBTB22O15209 634 aa12.39□□□□□ -0.43
RORA-214ENST00000561093 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
RORA-214ENST00000561093 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
RORA-214ENST00000561093 CHRDL2Q6WN34 429 aa12.26□□□□□ -0.45
RORA-214ENST00000561093 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
RORA-214ENST00000561093 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
RORA-214ENST00000561093 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
RORA-214ENST00000561093 FBLN2P98095 1184 aa12.03□□□□□ -0.48
RORA-214ENST00000561093 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
RORA-214ENST00000561093 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
RORA-214ENST00000561093 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
RORA-214ENST00000561093 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
RORA-214ENST00000561093 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
RORA-214ENST00000561093 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
RORA-214ENST00000561093 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
RORA-214ENST00000561093 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
RORA-214ENST00000561093 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
RORA-214ENST00000561093 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
RORA-214ENST00000561093 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
RORA-214ENST00000561093 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
RORA-214ENST00000561093 HAX1O00165 279 aa11.75□□□□□ -0.53
RORA-214ENST00000561093 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
RORA-214ENST00000561093 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
RORA-214ENST00000561093 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
RORA-214ENST00000561093 EVX2Q03828 476 aa11.58□□□□□ -0.56
RORA-214ENST00000561093 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
RORA-214ENST00000561093 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
RORA-214ENST00000561093 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
RORA-214ENST00000561093 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
RORA-214ENST00000561093 GABBR2O75899 941 aa11.35□□□□□ -0.59
RORA-214ENST00000561093 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
RORA-214ENST00000561093 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
RORA-214ENST00000561093 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
RORA-214ENST00000561093 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
RORA-214ENST00000561093 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
RORA-214ENST00000561093 CLCN6P51797 869 aa11.23□□□□□ -0.61
RORA-214ENST00000561093 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
RORA-214ENST00000561093 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
RORA-214ENST00000561093 LHX8Q68G74 356 aa11.09□□□□□ -0.63
RORA-214ENST00000561093 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
RORA-214ENST00000561093 PROM2Q8N271 834 aa11.08□□□□□ -0.64
RORA-214ENST00000561093 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
RORA-214ENST00000561093 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
RORA-214ENST00000561093 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
RORA-214ENST00000561093 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
RORA-214ENST00000561093 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
RORA-214ENST00000561093 PHF12Q96QT6 1004 aa10.93□□□□□ -0.66
RORA-214ENST00000561093 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
RORA-214ENST00000561093 MIER1Q8N108 512 aa10.81□□□□□ -0.68
RORA-214ENST00000561093 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
RORA-214ENST00000561093 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
RORA-214ENST00000561093 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
RORA-214ENST00000561093 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
RORA-214ENST00000561093 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms