RNA–Protein interactions for RNA: ENST00000561073.1

LINS1-212, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-212ENST00000561073 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
LINS1-212ENST00000561073 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
LINS1-212ENST00000561073 SENP3Q9H4L4 574 aaPredicted RBP22.05■■□□□ 1.12
LINS1-212ENST00000561073 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
LINS1-212ENST00000561073 FOXD1Q16676 465 aa20.36■□□□□ 0.85
LINS1-212ENST00000561073 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
LINS1-212ENST00000561073 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
LINS1-212ENST00000561073 ADRA2BP18089 450 aa19.16■□□□□ 0.66
LINS1-212ENST00000561073 PIAS4Q8N2W9 510 aaPredicted RBP19.15■□□□□ 0.66
LINS1-212ENST00000561073 MSH5O43196 834 aa19.12■□□□□ 0.65
LINS1-212ENST00000561073 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
LINS1-212ENST00000561073 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
LINS1-212ENST00000561073 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
LINS1-212ENST00000561073 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
LINS1-212ENST00000561073 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
LINS1-212ENST00000561073 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
LINS1-212ENST00000561073 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
LINS1-212ENST00000561073 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
LINS1-212ENST00000561073 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
LINS1-212ENST00000561073 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
LINS1-212ENST00000561073 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
LINS1-212ENST00000561073 KCNA4P22459 653 aa16.55■□□□□ 0.24
LINS1-212ENST00000561073 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
LINS1-212ENST00000561073 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
LINS1-212ENST00000561073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
LINS1-212ENST00000561073 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
LINS1-212ENST00000561073 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
LINS1-212ENST00000561073 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
LINS1-212ENST00000561073 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
LINS1-212ENST00000561073 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
LINS1-212ENST00000561073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
LINS1-212ENST00000561073 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
LINS1-212ENST00000561073 APLP2Q06481 763 aa15.63■□□□□ 0.09
LINS1-212ENST00000561073 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
LINS1-212ENST00000561073 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
LINS1-212ENST00000561073 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
LINS1-212ENST00000561073 CAPN15O75808 1086 aa15.44■□□□□ 0.06
LINS1-212ENST00000561073 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
LINS1-212ENST00000561073 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
LINS1-212ENST00000561073 DSG3P32926 999 aa15.3■□□□□ 0.04
LINS1-212ENST00000561073 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
LINS1-212ENST00000561073 ZBTB22O15209 634 aa15.17■□□□□ 0.02
LINS1-212ENST00000561073 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
LINS1-212ENST00000561073 ABCB7O75027 752 aa15.03■□□□□ -0
LINS1-212ENST00000561073 POLA2Q14181 598 aa14.91□□□□□ -0.02
LINS1-212ENST00000561073 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
LINS1-212ENST00000561073 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
LINS1-212ENST00000561073 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
LINS1-212ENST00000561073 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
LINS1-212ENST00000561073 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
LINS1-212ENST00000561073 FBLN2P98095 1184 aa14.53□□□□□ -0.08
LINS1-212ENST00000561073 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
LINS1-212ENST00000561073 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
LINS1-212ENST00000561073 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
LINS1-212ENST00000561073 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
LINS1-212ENST00000561073 SPDYE2Q495Y8 402 aa14.34□□□□□ -0.11
LINS1-212ENST00000561073 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
LINS1-212ENST00000561073 POTEHQ6S545 545 aa14.19□□□□□ -0.14
LINS1-212ENST00000561073 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
LINS1-212ENST00000561073 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
LINS1-212ENST00000561073 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
LINS1-212ENST00000561073 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
LINS1-212ENST00000561073 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
LINS1-212ENST00000561073 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
LINS1-212ENST00000561073 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINS1-212ENST00000561073 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINS1-212ENST00000561073 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
LINS1-212ENST00000561073 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
LINS1-212ENST00000561073 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
LINS1-212ENST00000561073 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
LINS1-212ENST00000561073 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
LINS1-212ENST00000561073 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
LINS1-212ENST00000561073 PROM2Q8N271 834 aa13.62□□□□□ -0.23
LINS1-212ENST00000561073 HAX1O00165 279 aa13.53□□□□□ -0.24
LINS1-212ENST00000561073 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
LINS1-212ENST00000561073 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
LINS1-212ENST00000561073 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
LINS1-212ENST00000561073 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
LINS1-212ENST00000561073 FKBP8Q14318 412 aa13.41□□□□□ -0.26
LINS1-212ENST00000561073 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
LINS1-212ENST00000561073 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINS1-212ENST00000561073 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
LINS1-212ENST00000561073 CLCN6P51797 869 aa13.27□□□□□ -0.29
LINS1-212ENST00000561073 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
LINS1-212ENST00000561073 EVX2Q03828 476 aa13.25□□□□□ -0.29
LINS1-212ENST00000561073 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
LINS1-212ENST00000561073 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
LINS1-212ENST00000561073 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
LINS1-212ENST00000561073 MIER1Q8N108 512 aa13.16□□□□□ -0.3
LINS1-212ENST00000561073 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
LINS1-212ENST00000561073 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
LINS1-212ENST00000561073 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
LINS1-212ENST00000561073 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
LINS1-212ENST00000561073 GABBR2O75899 941 aa13.09□□□□□ -0.31
LINS1-212ENST00000561073 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
LINS1-212ENST00000561073 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
LINS1-212ENST00000561073 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
LINS1-212ENST00000561073 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
LINS1-212ENST00000561073 NUBP1P53384 320 aa12.87□□□□□ -0.35
LINS1-212ENST00000561073 RASEFQ8IZ41 740 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms