RNA–Protein interactions for RNA: ENST00000560957.1

AKAP13-223, Transcript of A-kinase anchoring protein 13, human

TSL 3

Gene AKAP13, Length 751 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AKAP13-223	ENST00000560957	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.1	■■□□□ 1.13
AKAP13-223	ENST00000560957	CHIC1	Q5VXU3	224 aa		20.68	■□□□□ 0.9
AKAP13-223	ENST00000560957	SENP3	Q9H4L4	574 aa	Predicted RBP	18.95	■□□□□ 0.62
AKAP13-223	ENST00000560957	PHF23	Q9BUL5	403 aa	Predicted RBP	18.62	■□□□□ 0.57
AKAP13-223	ENST00000560957	FOXD1	Q16676	465 aa		17.68	■□□□□ 0.42
AKAP13-223	ENST00000560957	POTED	Q86YR6	584 aa		16.94	■□□□□ 0.3
AKAP13-223	ENST00000560957	MSH5	O43196	834 aa		16.73	■□□□□ 0.27
AKAP13-223	ENST00000560957	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.42	■□□□□ 0.22
AKAP13-223	ENST00000560957	PLPPR3	Q6T4P5	718 aa		16.33	■□□□□ 0.2
AKAP13-223	ENST00000560957	PPP6R1	Q9UPN7	881 aa		16.22	■□□□□ 0.19
AKAP13-223	ENST00000560957	ADRA2B	P18089	450 aa		16.13	■□□□□ 0.17
AKAP13-223	ENST00000560957	DMRT2	Q9Y5R5	561 aa		14.97	□□□□□ -0.01
AKAP13-223	ENST00000560957	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.91	□□□□□ -0.02
AKAP13-223	ENST00000560957	SCAF1	Q9H7N4	1312 aa	Known RBP	14.81	□□□□□ -0.04
AKAP13-223	ENST00000560957	CACNB1	Q02641	598 aa	Predicted RBP	14.54	□□□□□ -0.08
AKAP13-223	ENST00000560957	DCAF8L1	A6NGE4	600 aa		14.29	□□□□□ -0.12
AKAP13-223	ENST00000560957	HOXD11	P31277	338 aa	Predicted RBP	14.28	□□□□□ -0.12
AKAP13-223	ENST00000560957	PPP4R3CP	Q6ZMV5	832 aa		14.23	□□□□□ -0.13
AKAP13-223	ENST00000560957	RNF39	Q9H2S5	420 aa		14.23	□□□□□ -0.13
AKAP13-223	ENST00000560957	CNKSR2	Q8WXI2	1034 aa		14.08	□□□□□ -0.16
AKAP13-223	ENST00000560957	RNF216	Q9NWF9	866 aa	Predicted RBP	14.06	□□□□□ -0.16
AKAP13-223	ENST00000560957	C1QBP	Q07021	282 aa	Known RBP	14.02	□□□□□ -0.17
AKAP13-223	ENST00000560957	DNAJC5B	Q9UF47	199 aa		13.93	□□□□□ -0.18
AKAP13-223	ENST00000560957	NCBP3	Q53F19	620 aa	Known RBP	13.6	□□□□□ -0.23
AKAP13-223	ENST00000560957	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
AKAP13-223	ENST00000560957	NPM3	O75607	178 aa	Known RBP	13.38	□□□□□ -0.27
AKAP13-223	ENST00000560957		U3KPZ7	1027 aa	Predicted RBP	13.25	□□□□□ -0.29
AKAP13-223	ENST00000560957	POTEH	Q6S545	545 aa		13.2	□□□□□ -0.3
AKAP13-223	ENST00000560957	DSG3	P32926	999 aa		13.18	□□□□□ -0.3
AKAP13-223	ENST00000560957	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.14	□□□□□ -0.31
AKAP13-223	ENST00000560957	CAPN15	O75808	1086 aa		13.13	□□□□□ -0.31
AKAP13-223	ENST00000560957	SLC4A2	P04920	1241 aa		12.88	□□□□□ -0.35
AKAP13-223	ENST00000560957	APLP2	Q06481	763 aa		12.88	□□□□□ -0.35
AKAP13-223	ENST00000560957	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.85	□□□□□ -0.35
AKAP13-223	ENST00000560957	TRH	P20396	242 aa	Predicted RBP	12.82	□□□□□ -0.36
AKAP13-223	ENST00000560957	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.78	□□□□□ -0.36
AKAP13-223	ENST00000560957	ABCB7	O75027	752 aa		12.78	□□□□□ -0.36
AKAP13-223	ENST00000560957	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.78	□□□□□ -0.36
AKAP13-223	ENST00000560957	KCNA4	P22459	653 aa		12.77	□□□□□ -0.37
AKAP13-223	ENST00000560957	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.68	□□□□□ -0.38
AKAP13-223	ENST00000560957	RBM42	Q9BTD8	480 aa	Known RBP	12.62	□□□□□ -0.39
AKAP13-223	ENST00000560957	CHRDL2	Q6WN34	429 aa		12.47	□□□□□ -0.41
AKAP13-223	ENST00000560957	MYCN	P04198	464 aa	Predicted RBP	12.41	□□□□□ -0.42
AKAP13-223	ENST00000560957	POLA2	Q14181	598 aa		12.41	□□□□□ -0.42
AKAP13-223	ENST00000560957	AKT1S1	Q96B36	256 aa		12.24	□□□□□ -0.45
AKAP13-223	ENST00000560957	SP7	Q8TDD2	431 aa	Predicted RBP	12.21	□□□□□ -0.45
AKAP13-223	ENST00000560957	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.19	□□□□□ -0.46
AKAP13-223	ENST00000560957	REM2	Q8IYK8	340 aa	Predicted RBP	12.1	□□□□□ -0.47
AKAP13-223	ENST00000560957	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.1	□□□□□ -0.47
AKAP13-223	ENST00000560957	PIP4P2	Q8N4L2	257 aa		12.08	□□□□□ -0.48
AKAP13-223	ENST00000560957	FOXD4L1	Q9NU39	408 aa		12.07	□□□□□ -0.48
AKAP13-223	ENST00000560957	OSCAR	Q8IYS5	282 aa		12.04	□□□□□ -0.48
AKAP13-223	ENST00000560957	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.98	□□□□□ -0.49
AKAP13-223	ENST00000560957	PITPNM1	O00562	1244 aa		11.97	□□□□□ -0.49
AKAP13-223	ENST00000560957	FXR2	P51116	673 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
AKAP13-223	ENST00000560957	HAX1	O00165	279 aa		11.94	□□□□□ -0.5
AKAP13-223	ENST00000560957	SPDYE2B	A6NHP3	402 aa		11.77	□□□□□ -0.53
AKAP13-223	ENST00000560957	SPDYE6	P0CI01	402 aa		11.77	□□□□□ -0.53
AKAP13-223	ENST00000560957	SPDYE2	Q495Y8	402 aa		11.77	□□□□□ -0.53
AKAP13-223	ENST00000560957	ATXN8OS	P0DMR3	200 aa		11.76	□□□□□ -0.53
AKAP13-223	ENST00000560957	EVX2	Q03828	476 aa		11.76	□□□□□ -0.53
AKAP13-223	ENST00000560957	ZBTB22	O15209	634 aa		11.73	□□□□□ -0.53
AKAP13-223	ENST00000560957	FBLN2	P98095	1184 aa		11.69	□□□□□ -0.54
AKAP13-223	ENST00000560957	PRKAR2A	P13861	404 aa	Known RBP	11.65	□□□□□ -0.54
AKAP13-223	ENST00000560957	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.65	□□□□□ -0.54
AKAP13-223	ENST00000560957	C19orf67	A6NJJ6	358 aa		11.59	□□□□□ -0.55
AKAP13-223	ENST00000560957	CLEC11A	Q9Y240	323 aa		11.58	□□□□□ -0.56
AKAP13-223	ENST00000560957	SSUH2	Q9Y2M2	353 aa		11.58	□□□□□ -0.56
AKAP13-223	ENST00000560957	MKRN4P	Q13434	485 aa	Predicted RBP	11.55	□□□□□ -0.56
AKAP13-223	ENST00000560957	ZNF692	Q9BU19	519 aa	Predicted RBP	11.52	□□□□□ -0.57
AKAP13-223	ENST00000560957	GABBR2	O75899	941 aa		11.5	□□□□□ -0.57
AKAP13-223	ENST00000560957	LHX8	Q68G74	356 aa		11.43	□□□□□ -0.58
AKAP13-223	ENST00000560957	CHADL	Q6NUI6	762 aa		11.4	□□□□□ -0.58
AKAP13-223	ENST00000560957	PRR29	P0C7W0	189 aa		11.37	□□□□□ -0.59
AKAP13-223	ENST00000560957	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
AKAP13-223	ENST00000560957	CD44	P16070	742 aa	Known RBP	11.26	□□□□□ -0.61
AKAP13-223	ENST00000560957	CLCN6	P51797	869 aa		11.26	□□□□□ -0.61
AKAP13-223	ENST00000560957	POTEI	P0CG38	1075 aa		11.25	□□□□□ -0.61
AKAP13-223	ENST00000560957	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.24	□□□□□ -0.61
AKAP13-223	ENST00000560957	ZNF579	Q8NAF0	562 aa	Known RBP	11.11	□□□□□ -0.63
AKAP13-223	ENST00000560957	DCBLD2	Q96PD2	775 aa		11.1	□□□□□ -0.63
AKAP13-223	ENST00000560957	ZRANB1	Q9UGI0	708 aa		11.03	□□□□□ -0.64
AKAP13-223	ENST00000560957	CREBZF	Q9NS37	354 aa		11.01	□□□□□ -0.65
AKAP13-223	ENST00000560957	STAG3	Q9UJ98	1225 aa		10.99	□□□□□ -0.65
AKAP13-223	ENST00000560957	GALR2	O43603	387 aa	Predicted RBP	10.96	□□□□□ -0.65
AKAP13-223	ENST00000560957	PLSCR2	Q9NRY7	297 aa		10.96	□□□□□ -0.65
AKAP13-223	ENST00000560957	OTUD5	Q96G74	571 aa		10.91	□□□□□ -0.66
AKAP13-223	ENST00000560957	PAK3	O75914	559 aa	Predicted RBP	10.88	□□□□□ -0.67
AKAP13-223	ENST00000560957	POTEB2	H3BUK9	544 aa		10.86	□□□□□ -0.67
AKAP13-223	ENST00000560957	CSRNP3	Q8WYN3	585 aa		10.85	□□□□□ -0.67
AKAP13-223	ENST00000560957	PHF12	Q96QT6	1004 aa		10.83	□□□□□ -0.68
AKAP13-223	ENST00000560957	SPDYE4	A6NLX3	237 aa		10.8	□□□□□ -0.68
AKAP13-223	ENST00000560957	NPM1	P06748	294 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
AKAP13-223	ENST00000560957	MNX1	P50219	401 aa	Predicted RBP	10.79	□□□□□ -0.68
AKAP13-223	ENST00000560957	POTEM	A6NI47	508 aa		10.77	□□□□□ -0.69
AKAP13-223	ENST00000560957	PELP1	Q8IZL8	1130 aa	Known RBP	10.77	□□□□□ -0.69
AKAP13-223	ENST00000560957	ASTL	Q6HA08	431 aa	Predicted RBP	10.74	□□□□□ -0.69
AKAP13-223	ENST00000560957	POTEG	Q6S5H5	508 aa		10.73	□□□□□ -0.69
AKAP13-223	ENST00000560957	METRN	Q9UJH8	293 aa		10.71	□□□□□ -0.69
AKAP13-223	ENST00000560957	C7	P10643	843 aa		10.7	□□□□□ -0.7

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