RNA–Protein interactions for RNA: ENST00000560868.1

CHRNB4-206, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-206ENST00000560868 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
CHRNB4-206ENST00000560868 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
CHRNB4-206ENST00000560868 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
CHRNB4-206ENST00000560868 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
CHRNB4-206ENST00000560868 FOXD1Q16676 465 aa14.69□□□□□ -0.06
CHRNB4-206ENST00000560868 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
CHRNB4-206ENST00000560868 MSH5O43196 834 aa13.76□□□□□ -0.21
CHRNB4-206ENST00000560868 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
CHRNB4-206ENST00000560868 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
CHRNB4-206ENST00000560868 ADRA2BP18089 450 aa13.65□□□□□ -0.22
CHRNB4-206ENST00000560868 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
CHRNB4-206ENST00000560868 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
CHRNB4-206ENST00000560868 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
CHRNB4-206ENST00000560868 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
CHRNB4-206ENST00000560868 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
CHRNB4-206ENST00000560868 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
CHRNB4-206ENST00000560868 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
CHRNB4-206ENST00000560868 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
CHRNB4-206ENST00000560868 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
CHRNB4-206ENST00000560868 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
CHRNB4-206ENST00000560868 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
CHRNB4-206ENST00000560868 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
CHRNB4-206ENST00000560868 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
CHRNB4-206ENST00000560868 DNAJC5BQ9UF47 199 aa11.56□□□□□ -0.56
CHRNB4-206ENST00000560868 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
CHRNB4-206ENST00000560868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHRNB4-206ENST00000560868 KCNA4P22459 653 aa11.24□□□□□ -0.61
CHRNB4-206ENST00000560868 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
CHRNB4-206ENST00000560868 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
CHRNB4-206ENST00000560868 CAPN15O75808 1086 aa11.03□□□□□ -0.64
CHRNB4-206ENST00000560868 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
CHRNB4-206ENST00000560868 DSG3P32926 999 aa10.97□□□□□ -0.65
CHRNB4-206ENST00000560868 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
CHRNB4-206ENST00000560868 APLP2Q06481 763 aa10.84□□□□□ -0.67
CHRNB4-206ENST00000560868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
CHRNB4-206ENST00000560868 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
CHRNB4-206ENST00000560868 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
CHRNB4-206ENST00000560868 ABCB7O75027 752 aa10.77□□□□□ -0.69
CHRNB4-206ENST00000560868 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
CHRNB4-206ENST00000560868 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
CHRNB4-206ENST00000560868 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
CHRNB4-206ENST00000560868 POTEHQ6S545 545 aa10.62□□□□□ -0.71
CHRNB4-206ENST00000560868 POLA2Q14181 598 aa10.55□□□□□ -0.72
CHRNB4-206ENST00000560868 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
CHRNB4-206ENST00000560868 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
CHRNB4-206ENST00000560868 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
CHRNB4-206ENST00000560868 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
CHRNB4-206ENST00000560868 CSRNP3Q8WYN3 585 aa10.39□□□□□ -0.75
CHRNB4-206ENST00000560868 ZBTB22O15209 634 aa10.33□□□□□ -0.76
CHRNB4-206ENST00000560868 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
CHRNB4-206ENST00000560868 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.77
CHRNB4-206ENST00000560868 AKT1S1Q96B36 256 aa10.21□□□□□ -0.77
CHRNB4-206ENST00000560868 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
CHRNB4-206ENST00000560868 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
CHRNB4-206ENST00000560868 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
CHRNB4-206ENST00000560868 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
CHRNB4-206ENST00000560868 PITPNM1O00562 1244 aa10.01□□□□□ -0.81
CHRNB4-206ENST00000560868 FBLN2P98095 1184 aa10.01□□□□□ -0.81
CHRNB4-206ENST00000560868 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
CHRNB4-206ENST00000560868 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
CHRNB4-206ENST00000560868 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
CHRNB4-206ENST00000560868 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHRNB4-206ENST00000560868 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
CHRNB4-206ENST00000560868 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
CHRNB4-206ENST00000560868 HAX1O00165 279 aa9.88□□□□□ -0.83
CHRNB4-206ENST00000560868 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
CHRNB4-206ENST00000560868 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
CHRNB4-206ENST00000560868 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
CHRNB4-206ENST00000560868 SPDYE1Q8NFV5 336 aaPredicted RBP9.81□□□□□ -0.84
CHRNB4-206ENST00000560868 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
CHRNB4-206ENST00000560868 EVX2Q03828 476 aa9.75□□□□□ -0.85
CHRNB4-206ENST00000560868 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHRNB4-206ENST00000560868 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
CHRNB4-206ENST00000560868 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
CHRNB4-206ENST00000560868 C19orf67A6NJJ6 358 aa9.62□□□□□ -0.87
CHRNB4-206ENST00000560868 GABBR2O75899 941 aa9.52□□□□□ -0.89
CHRNB4-206ENST00000560868 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
CHRNB4-206ENST00000560868 SPDYE4A6NLX3 237 aa9.44□□□□□ -0.9
CHRNB4-206ENST00000560868 CD44P16070 742 aaKnown RBP9.44□□□□□ -0.9
CHRNB4-206ENST00000560868 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
CHRNB4-206ENST00000560868 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
CHRNB4-206ENST00000560868 FKBP8Q14318 412 aa9.34□□□□□ -0.91
CHRNB4-206ENST00000560868 CLCN6P51797 869 aa9.32□□□□□ -0.92
CHRNB4-206ENST00000560868 LHX8Q68G74 356 aa9.32□□□□□ -0.92
CHRNB4-206ENST00000560868 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
CHRNB4-206ENST00000560868 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
CHRNB4-206ENST00000560868 ZNF579Q8NAF0 562 aaKnown RBP9.27□□□□□ -0.93
CHRNB4-206ENST00000560868 DCBLD2Q96PD2 775 aa9.25□□□□□ -0.93
CHRNB4-206ENST00000560868 NPM1P06748 294 aaKnown RBP eCLIP9.21□□□□□ -0.94
CHRNB4-206ENST00000560868 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
CHRNB4-206ENST00000560868 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
CHRNB4-206ENST00000560868 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
CHRNB4-206ENST00000560868 PROM2Q8N271 834 aa9.16□□□□□ -0.94
CHRNB4-206ENST00000560868 PHF12Q96QT6 1004 aa9.16□□□□□ -0.94
CHRNB4-206ENST00000560868 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
CHRNB4-206ENST00000560868 MIER1Q8N108 512 aa9.04□□□□□ -0.96
CHRNB4-206ENST00000560868 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
CHRNB4-206ENST00000560868 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
CHRNB4-206ENST00000560868 POTEB2H3BUK9 544 aa9.01□□□□□ -0.97
CHRNB4-206ENST00000560868 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms