RNA–Protein interactions for RNA: ENST00000560860.5

TTC23-218, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 3

Gene TTC23, Length 549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-218ENST00000560860 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
TTC23-218ENST00000560860 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
TTC23-218ENST00000560860 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
TTC23-218ENST00000560860 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
TTC23-218ENST00000560860 FOXD1Q16676 465 aa22.54■■□□□ 1.2
TTC23-218ENST00000560860 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
TTC23-218ENST00000560860 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
TTC23-218ENST00000560860 ADRA2BP18089 450 aa20.97■□□□□ 0.95
TTC23-218ENST00000560860 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
TTC23-218ENST00000560860 MSH5O43196 834 aa20.92■□□□□ 0.94
TTC23-218ENST00000560860 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
TTC23-218ENST00000560860 MAPK8IP2Q13387 824 aaPredicted RBP19.35■□□□□ 0.69
TTC23-218ENST00000560860 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
TTC23-218ENST00000560860 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
TTC23-218ENST00000560860 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
TTC23-218ENST00000560860 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
TTC23-218ENST00000560860 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
TTC23-218ENST00000560860 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
TTC23-218ENST00000560860 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
TTC23-218ENST00000560860 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
TTC23-218ENST00000560860 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
TTC23-218ENST00000560860 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
TTC23-218ENST00000560860 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
TTC23-218ENST00000560860 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
TTC23-218ENST00000560860 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
TTC23-218ENST00000560860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.38
TTC23-218ENST00000560860 KCNA4P22459 653 aa17.24■□□□□ 0.35
TTC23-218ENST00000560860 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
TTC23-218ENST00000560860 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
TTC23-218ENST00000560860 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
TTC23-218ENST00000560860 CAPN15O75808 1086 aa16.84■□□□□ 0.29
TTC23-218ENST00000560860 DSG3P32926 999 aa16.81■□□□□ 0.28
TTC23-218ENST00000560860 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
TTC23-218ENST00000560860 ABCB7O75027 752 aa16.53■□□□□ 0.24
TTC23-218ENST00000560860 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
TTC23-218ENST00000560860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
TTC23-218ENST00000560860 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
TTC23-218ENST00000560860 APLP2Q06481 763 aa16.31■□□□□ 0.2
TTC23-218ENST00000560860 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
TTC23-218ENST00000560860 POTEHQ6S545 545 aa16.27■□□□□ 0.2
TTC23-218ENST00000560860 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
TTC23-218ENST00000560860 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
TTC23-218ENST00000560860 POLA2Q14181 598 aa16.09■□□□□ 0.17
TTC23-218ENST00000560860 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
TTC23-218ENST00000560860 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
TTC23-218ENST00000560860 ZBTB22O15209 634 aa15.92■□□□□ 0.14
TTC23-218ENST00000560860 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
TTC23-218ENST00000560860 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
TTC23-218ENST00000560860 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
TTC23-218ENST00000560860 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
TTC23-218ENST00000560860 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
TTC23-218ENST00000560860 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
TTC23-218ENST00000560860 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
TTC23-218ENST00000560860 PIP4P2Q8N4L2 257 aa15.35■□□□□ 0.05
TTC23-218ENST00000560860 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
TTC23-218ENST00000560860 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
TTC23-218ENST00000560860 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
TTC23-218ENST00000560860 FBLN2P98095 1184 aa15.16■□□□□ 0.02
TTC23-218ENST00000560860 SP7Q8TDD2 431 aaPredicted RBP15.15■□□□□ 0.02
TTC23-218ENST00000560860 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
TTC23-218ENST00000560860 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
TTC23-218ENST00000560860 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
TTC23-218ENST00000560860 HAX1O00165 279 aa15.06■□□□□ 0
TTC23-218ENST00000560860 EVX2Q03828 476 aa15.06■□□□□ 0
TTC23-218ENST00000560860 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
TTC23-218ENST00000560860 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
TTC23-218ENST00000560860 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
TTC23-218ENST00000560860 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
TTC23-218ENST00000560860 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
TTC23-218ENST00000560860 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
TTC23-218ENST00000560860 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
TTC23-218ENST00000560860 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
TTC23-218ENST00000560860 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
TTC23-218ENST00000560860 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
TTC23-218ENST00000560860 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
TTC23-218ENST00000560860 GABBR2O75899 941 aa14.57□□□□□ -0.08
TTC23-218ENST00000560860 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
TTC23-218ENST00000560860 CD44P16070 742 aaKnown RBP14.41□□□□□ -0.1
TTC23-218ENST00000560860 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
TTC23-218ENST00000560860 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
TTC23-218ENST00000560860 POTEIP0CG38 1075 aa14.36□□□□□ -0.11
TTC23-218ENST00000560860 LHX8Q68G74 356 aa14.23□□□□□ -0.13
TTC23-218ENST00000560860 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
TTC23-218ENST00000560860 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
TTC23-218ENST00000560860 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
TTC23-218ENST00000560860 MNX1P50219 401 aaPredicted RBP14.14□□□□□ -0.15
TTC23-218ENST00000560860 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
TTC23-218ENST00000560860 PHF12Q96QT6 1004 aa14.08□□□□□ -0.16
TTC23-218ENST00000560860 DCBLD2Q96PD2 775 aa14.04□□□□□ -0.16
TTC23-218ENST00000560860 CLCN6P51797 869 aa14□□□□□ -0.17
TTC23-218ENST00000560860 PROM2Q8N271 834 aa14□□□□□ -0.17
TTC23-218ENST00000560860 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
TTC23-218ENST00000560860 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
TTC23-218ENST00000560860 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
TTC23-218ENST00000560860 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
TTC23-218ENST00000560860 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
TTC23-218ENST00000560860 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
TTC23-218ENST00000560860 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
TTC23-218ENST00000560860 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
TTC23-218ENST00000560860 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms