RNA–Protein interactions for RNA: ENST00000560764.5

TCF12-218, Transcript of transcription factor 12, humanhuman

TSL 3

Gene TCF12, Length 1,230 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-218ENST00000560764 AEBP2Q6ZN18 517 aaPredicted RBP27.88■■■□□ 2.05
TCF12-218ENST00000560764 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
TCF12-218ENST00000560764 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
TCF12-218ENST00000560764 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
TCF12-218ENST00000560764 FOXD1Q16676 465 aa22.4■■□□□ 1.18
TCF12-218ENST00000560764 POTEDQ86YR6 584 aa22.06■■□□□ 1.12
TCF12-218ENST00000560764 MSH5O43196 834 aa21.37■■□□□ 1.01
TCF12-218ENST00000560764 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
TCF12-218ENST00000560764 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
TCF12-218ENST00000560764 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
TCF12-218ENST00000560764 ADRA2BP18089 450 aa20.2■□□□□ 0.82
TCF12-218ENST00000560764 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
TCF12-218ENST00000560764 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
TCF12-218ENST00000560764 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
TCF12-218ENST00000560764 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
TCF12-218ENST00000560764 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
TCF12-218ENST00000560764 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
TCF12-218ENST00000560764 HOXD11P31277 338 aaPredicted RBP17.92■□□□□ 0.46
TCF12-218ENST00000560764 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
TCF12-218ENST00000560764 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
TCF12-218ENST00000560764 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
TCF12-218ENST00000560764 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
TCF12-218ENST00000560764 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
TCF12-218ENST00000560764 POTEHQ6S545 545 aa17.17■□□□□ 0.34
TCF12-218ENST00000560764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
TCF12-218ENST00000560764 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
TCF12-218ENST00000560764 DSG3P32926 999 aa16.69■□□□□ 0.26
TCF12-218ENST00000560764 CAPN15O75808 1086 aa16.61■□□□□ 0.25
TCF12-218ENST00000560764 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
TCF12-218ENST00000560764 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
TCF12-218ENST00000560764 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
TCF12-218ENST00000560764 APLP2Q06481 763 aa16.19■□□□□ 0.18
TCF12-218ENST00000560764 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
TCF12-218ENST00000560764 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
TCF12-218ENST00000560764 ABCB7O75027 752 aa16.11■□□□□ 0.17
TCF12-218ENST00000560764 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
TCF12-218ENST00000560764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
TCF12-218ENST00000560764 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
TCF12-218ENST00000560764 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
TCF12-218ENST00000560764 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
TCF12-218ENST00000560764 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
TCF12-218ENST00000560764 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
TCF12-218ENST00000560764 POLA2Q14181 598 aa15.52■□□□□ 0.08
TCF12-218ENST00000560764 KCNA4P22459 653 aa15.47■□□□□ 0.07
TCF12-218ENST00000560764 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
TCF12-218ENST00000560764 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
TCF12-218ENST00000560764 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
TCF12-218ENST00000560764 HAX1O00165 279 aa15.28■□□□□ 0.04
TCF12-218ENST00000560764 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
TCF12-218ENST00000560764 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
TCF12-218ENST00000560764 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
TCF12-218ENST00000560764 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
TCF12-218ENST00000560764 OSCARQ8IYS5 282 aa15.08■□□□□ 0
TCF12-218ENST00000560764 EVX2Q03828 476 aa14.95□□□□□ -0.02
TCF12-218ENST00000560764 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
TCF12-218ENST00000560764 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
TCF12-218ENST00000560764 LHX8Q68G74 356 aa14.73□□□□□ -0.05
TCF12-218ENST00000560764 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
TCF12-218ENST00000560764 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
TCF12-218ENST00000560764 C19orf67A6NJJ6 358 aa14.69□□□□□ -0.06
TCF12-218ENST00000560764 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
TCF12-218ENST00000560764 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
TCF12-218ENST00000560764 GABBR2O75899 941 aa14.64□□□□□ -0.07
TCF12-218ENST00000560764 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
TCF12-218ENST00000560764 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
TCF12-218ENST00000560764 FBLN2P98095 1184 aa14.52□□□□□ -0.09
TCF12-218ENST00000560764 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
TCF12-218ENST00000560764 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
TCF12-218ENST00000560764 PLSCR2Q9NRY7 297 aa14.41□□□□□ -0.1
TCF12-218ENST00000560764 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
TCF12-218ENST00000560764 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
TCF12-218ENST00000560764 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
TCF12-218ENST00000560764 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
TCF12-218ENST00000560764 CLCN6P51797 869 aa14.29□□□□□ -0.12
TCF12-218ENST00000560764 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
TCF12-218ENST00000560764 CD44P16070 742 aaKnown RBP14.23□□□□□ -0.13
TCF12-218ENST00000560764 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
TCF12-218ENST00000560764 ZBTB22O15209 634 aa14.18□□□□□ -0.14
TCF12-218ENST00000560764 DCBLD2Q96PD2 775 aa14.13□□□□□ -0.15
TCF12-218ENST00000560764 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
TCF12-218ENST00000560764 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
TCF12-218ENST00000560764 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
TCF12-218ENST00000560764 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
TCF12-218ENST00000560764 POTEMA6NI47 508 aa13.92□□□□□ -0.18
TCF12-218ENST00000560764 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
TCF12-218ENST00000560764 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
TCF12-218ENST00000560764 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
TCF12-218ENST00000560764 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
TCF12-218ENST00000560764 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
TCF12-218ENST00000560764 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
TCF12-218ENST00000560764 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
TCF12-218ENST00000560764 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
TCF12-218ENST00000560764 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
TCF12-218ENST00000560764 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
TCF12-218ENST00000560764 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
TCF12-218ENST00000560764 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
TCF12-218ENST00000560764 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
TCF12-218ENST00000560764 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
TCF12-218ENST00000560764 C7P10643 843 aa13.52□□□□□ -0.25
TCF12-218ENST00000560764 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms