RNA–Protein interactions for RNA: ENST00000560739.1

NTRK3-219, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 2

Gene NTRK3, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-219ENST00000560739 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
NTRK3-219ENST00000560739 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
NTRK3-219ENST00000560739 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
NTRK3-219ENST00000560739 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
NTRK3-219ENST00000560739 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
NTRK3-219ENST00000560739 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
NTRK3-219ENST00000560739 FOXD1Q16676 465 aa15.98■□□□□ 0.15
NTRK3-219ENST00000560739 ADRA2BP18089 450 aa15.71■□□□□ 0.11
NTRK3-219ENST00000560739 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
NTRK3-219ENST00000560739 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
NTRK3-219ENST00000560739 MSH5O43196 834 aa14.95□□□□□ -0.02
NTRK3-219ENST00000560739 KCNA4P22459 653 aa14.89□□□□□ -0.03
NTRK3-219ENST00000560739 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
NTRK3-219ENST00000560739 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
NTRK3-219ENST00000560739 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
NTRK3-219ENST00000560739 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
NTRK3-219ENST00000560739 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
NTRK3-219ENST00000560739 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
NTRK3-219ENST00000560739 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
NTRK3-219ENST00000560739 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
NTRK3-219ENST00000560739 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
NTRK3-219ENST00000560739 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
NTRK3-219ENST00000560739 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
NTRK3-219ENST00000560739 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
NTRK3-219ENST00000560739 ZBTB22O15209 634 aa13.71□□□□□ -0.21
NTRK3-219ENST00000560739 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
NTRK3-219ENST00000560739 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
NTRK3-219ENST00000560739 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
NTRK3-219ENST00000560739 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
NTRK3-219ENST00000560739 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
NTRK3-219ENST00000560739 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
NTRK3-219ENST00000560739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
NTRK3-219ENST00000560739 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
NTRK3-219ENST00000560739 POTEHQ6S545 545 aa12.96□□□□□ -0.33
NTRK3-219ENST00000560739 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
NTRK3-219ENST00000560739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
NTRK3-219ENST00000560739 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
NTRK3-219ENST00000560739 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
NTRK3-219ENST00000560739 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
NTRK3-219ENST00000560739 APLP2Q06481 763 aa12.65□□□□□ -0.38
NTRK3-219ENST00000560739 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
NTRK3-219ENST00000560739 FKBP8Q14318 412 aa12.61□□□□□ -0.39
NTRK3-219ENST00000560739 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
NTRK3-219ENST00000560739 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
NTRK3-219ENST00000560739 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
NTRK3-219ENST00000560739 CAPN15O75808 1086 aa12.4□□□□□ -0.42
NTRK3-219ENST00000560739 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
NTRK3-219ENST00000560739 POLA2Q14181 598 aa12.3□□□□□ -0.44
NTRK3-219ENST00000560739 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
NTRK3-219ENST00000560739 FBLN2P98095 1184 aa12.25□□□□□ -0.45
NTRK3-219ENST00000560739 ABCB7O75027 752 aa12.22□□□□□ -0.45
NTRK3-219ENST00000560739 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
NTRK3-219ENST00000560739 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
NTRK3-219ENST00000560739 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
NTRK3-219ENST00000560739 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
NTRK3-219ENST00000560739 DSG3P32926 999 aa12.05□□□□□ -0.48
NTRK3-219ENST00000560739 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
NTRK3-219ENST00000560739 PROM2Q8N271 834 aa12.01□□□□□ -0.49
NTRK3-219ENST00000560739 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
NTRK3-219ENST00000560739 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
NTRK3-219ENST00000560739 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
NTRK3-219ENST00000560739 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
NTRK3-219ENST00000560739 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
NTRK3-219ENST00000560739 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
NTRK3-219ENST00000560739 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
NTRK3-219ENST00000560739 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
NTRK3-219ENST00000560739 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
NTRK3-219ENST00000560739 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
NTRK3-219ENST00000560739 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
NTRK3-219ENST00000560739 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
NTRK3-219ENST00000560739 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
NTRK3-219ENST00000560739 MIER1Q8N108 512 aa11.52□□□□□ -0.57
NTRK3-219ENST00000560739 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
NTRK3-219ENST00000560739 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
NTRK3-219ENST00000560739 PKD2Q13563 968 aa11.48□□□□□ -0.57
NTRK3-219ENST00000560739 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
NTRK3-219ENST00000560739 DCAF8L2P0C7V8 631 aa11.47□□□□□ -0.57
NTRK3-219ENST00000560739 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
NTRK3-219ENST00000560739 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
NTRK3-219ENST00000560739 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
NTRK3-219ENST00000560739 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
NTRK3-219ENST00000560739 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
NTRK3-219ENST00000560739 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
NTRK3-219ENST00000560739 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
NTRK3-219ENST00000560739 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
NTRK3-219ENST00000560739 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
NTRK3-219ENST00000560739 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
NTRK3-219ENST00000560739 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
NTRK3-219ENST00000560739 RGL2O15211 777 aa11.24□□□□□ -0.61
NTRK3-219ENST00000560739 CREBZFQ9NS37 354 aa11.22□□□□□ -0.61
NTRK3-219ENST00000560739 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
NTRK3-219ENST00000560739 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
NTRK3-219ENST00000560739 NUBP1P53384 320 aa11.17□□□□□ -0.62
NTRK3-219ENST00000560739 GSE1Q14687 1217 aa11.16□□□□□ -0.62
NTRK3-219ENST00000560739 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
NTRK3-219ENST00000560739 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
NTRK3-219ENST00000560739 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
NTRK3-219ENST00000560739 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
NTRK3-219ENST00000560739 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
NTRK3-219ENST00000560739 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms