RNA–Protein interactions for RNA: ENST00000560695.1

SLTM-225, Transcript of SAFB like transcription modulator, humanhuman

TSL 2

Gene SLTM, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-225ENST00000560695 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
SLTM-225ENST00000560695 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
SLTM-225ENST00000560695 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
SLTM-225ENST00000560695 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
SLTM-225ENST00000560695 FOXD1Q16676 465 aa19.56■□□□□ 0.72
SLTM-225ENST00000560695 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
SLTM-225ENST00000560695 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
SLTM-225ENST00000560695 ADRA2BP18089 450 aa18.54■□□□□ 0.56
SLTM-225ENST00000560695 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
SLTM-225ENST00000560695 MSH5O43196 834 aa18.11■□□□□ 0.49
SLTM-225ENST00000560695 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
SLTM-225ENST00000560695 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
SLTM-225ENST00000560695 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
SLTM-225ENST00000560695 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
SLTM-225ENST00000560695 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
SLTM-225ENST00000560695 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
SLTM-225ENST00000560695 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
SLTM-225ENST00000560695 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
SLTM-225ENST00000560695 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
SLTM-225ENST00000560695 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
SLTM-225ENST00000560695 KCNA4P22459 653 aa16.07■□□□□ 0.16
SLTM-225ENST00000560695 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
SLTM-225ENST00000560695 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
SLTM-225ENST00000560695 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
SLTM-225ENST00000560695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.073e-8■■□□□ 11.4
SLTM-225ENST00000560695 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
SLTM-225ENST00000560695 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
SLTM-225ENST00000560695 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
SLTM-225ENST00000560695 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
SLTM-225ENST00000560695 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
SLTM-225ENST00000560695 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
SLTM-225ENST00000560695 FOXD4L1Q9NU39 408 aa14.85□□□□□ -0.03
SLTM-225ENST00000560695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
SLTM-225ENST00000560695 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
SLTM-225ENST00000560695 CAPN15O75808 1086 aa14.81□□□□□ -0.04
SLTM-225ENST00000560695 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
SLTM-225ENST00000560695 ZBTB22O15209 634 aa14.8□□□□□ -0.04
SLTM-225ENST00000560695 SAMD1Q6SPF0 538 aaPredicted RBP14.76□□□□□ -0.05
SLTM-225ENST00000560695 APLP2Q06481 763 aa14.73□□□□□ -0.05
SLTM-225ENST00000560695 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
SLTM-225ENST00000560695 DSG3P32926 999 aa14.65□□□□□ -0.06
SLTM-225ENST00000560695 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
SLTM-225ENST00000560695 ABCB7O75027 752 aa14.52□□□□□ -0.09
SLTM-225ENST00000560695 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
SLTM-225ENST00000560695 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
SLTM-225ENST00000560695 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
SLTM-225ENST00000560695 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
SLTM-225ENST00000560695 POLA2Q14181 598 aa14.38□□□□□ -0.11
SLTM-225ENST00000560695 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
SLTM-225ENST00000560695 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
SLTM-225ENST00000560695 FBLN2P98095 1184 aa13.86□□□□□ -0.19
SLTM-225ENST00000560695 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
SLTM-225ENST00000560695 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
SLTM-225ENST00000560695 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
SLTM-225ENST00000560695 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
SLTM-225ENST00000560695 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
SLTM-225ENST00000560695 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
SLTM-225ENST00000560695 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
SLTM-225ENST00000560695 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
SLTM-225ENST00000560695 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
SLTM-225ENST00000560695 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
SLTM-225ENST00000560695 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
SLTM-225ENST00000560695 POTEHQ6S545 545 aa13.49□□□□□ -0.25
SLTM-225ENST00000560695 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
SLTM-225ENST00000560695 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLTM-225ENST00000560695 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
SLTM-225ENST00000560695 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
SLTM-225ENST00000560695 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
SLTM-225ENST00000560695 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
SLTM-225ENST00000560695 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.292e-7■■□□□ 13.4
SLTM-225ENST00000560695 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
SLTM-225ENST00000560695 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SLTM-225ENST00000560695 PROM2Q8N271 834 aa13.07□□□□□ -0.32
SLTM-225ENST00000560695 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
SLTM-225ENST00000560695 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
SLTM-225ENST00000560695 FKBP8Q14318 412 aa13.04□□□□□ -0.32
SLTM-225ENST00000560695 HAX1O00165 279 aa12.96□□□□□ -0.33
SLTM-225ENST00000560695 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
SLTM-225ENST00000560695 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
SLTM-225ENST00000560695 EVX2Q03828 476 aa12.87□□□□□ -0.35
SLTM-225ENST00000560695 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
SLTM-225ENST00000560695 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
SLTM-225ENST00000560695 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
SLTM-225ENST00000560695 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
SLTM-225ENST00000560695 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
SLTM-225ENST00000560695 MIER1Q8N108 512 aa12.74□□□□□ -0.37
SLTM-225ENST00000560695 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
SLTM-225ENST00000560695 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLTM-225ENST00000560695 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
SLTM-225ENST00000560695 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
SLTM-225ENST00000560695 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
SLTM-225ENST00000560695 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
SLTM-225ENST00000560695 GABBR2O75899 941 aa12.57□□□□□ -0.4
SLTM-225ENST00000560695 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
SLTM-225ENST00000560695 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
SLTM-225ENST00000560695 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
SLTM-225ENST00000560695 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
SLTM-225ENST00000560695 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
SLTM-225ENST00000560695 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
SLTM-225ENST00000560695 CLCN6P51797 869 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms