RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-209ENST00000560559 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
BLM-209ENST00000560559 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
BLM-209ENST00000560559 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
BLM-209ENST00000560559 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
BLM-209ENST00000560559 FOXD1Q16676 465 aa20.52■□□□□ 0.88
BLM-209ENST00000560559 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
BLM-209ENST00000560559 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
BLM-209ENST00000560559 MSH5O43196 834 aa19.23■□□□□ 0.67
BLM-209ENST00000560559 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
BLM-209ENST00000560559 ADRA2BP18089 450 aa19.2■□□□□ 0.66
BLM-209ENST00000560559 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
BLM-209ENST00000560559 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
BLM-209ENST00000560559 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
BLM-209ENST00000560559 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
BLM-209ENST00000560559 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
BLM-209ENST00000560559 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
BLM-209ENST00000560559 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
BLM-209ENST00000560559 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
BLM-209ENST00000560559 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
BLM-209ENST00000560559 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
BLM-209ENST00000560559 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
BLM-209ENST00000560559 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
BLM-209ENST00000560559 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
BLM-209ENST00000560559 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
BLM-209ENST00000560559 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
BLM-209ENST00000560559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
BLM-209ENST00000560559 KCNA4P22459 653 aa16.11■□□□□ 0.17
BLM-209ENST00000560559 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
BLM-209ENST00000560559 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
BLM-209ENST00000560559 CAPN15O75808 1086 aa15.55■□□□□ 0.08
BLM-209ENST00000560559 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
BLM-209ENST00000560559 APLP2Q06481 763 aa15.4■□□□□ 0.06
BLM-209ENST00000560559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
BLM-209ENST00000560559 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
BLM-209ENST00000560559 DSG3P32926 999 aa15.36■□□□□ 0.05
BLM-209ENST00000560559 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
BLM-209ENST00000560559 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
BLM-209ENST00000560559 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
BLM-209ENST00000560559 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
BLM-209ENST00000560559 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
BLM-209ENST00000560559 ABCB7O75027 752 aa15.16■□□□□ 0.02
BLM-209ENST00000560559 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
BLM-209ENST00000560559 POLA2Q14181 598 aa14.88□□□□□ -0.03
BLM-209ENST00000560559 ZBTB22O15209 634 aa14.76□□□□□ -0.05
BLM-209ENST00000560559 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
BLM-209ENST00000560559 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
BLM-209ENST00000560559 POTEHQ6S545 545 aa14.64□□□□□ -0.07
BLM-209ENST00000560559 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
BLM-209ENST00000560559 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
BLM-209ENST00000560559 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
BLM-209ENST00000560559 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
BLM-209ENST00000560559 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
BLM-209ENST00000560559 FBLN2P98095 1184 aa14.29□□□□□ -0.12
BLM-209ENST00000560559 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
BLM-209ENST00000560559 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
BLM-209ENST00000560559 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
BLM-209ENST00000560559 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
BLM-209ENST00000560559 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
BLM-209ENST00000560559 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
BLM-209ENST00000560559 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
BLM-209ENST00000560559 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
BLM-209ENST00000560559 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
BLM-209ENST00000560559 PIP4P2Q8N4L2 257 aa14□□□□□ -0.17
BLM-209ENST00000560559 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
BLM-209ENST00000560559 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
BLM-209ENST00000560559 SPDYE1Q8NFV5 336 aaPredicted RBP13.89□□□□□ -0.19
BLM-209ENST00000560559 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
BLM-209ENST00000560559 HAX1O00165 279 aa13.8□□□□□ -0.2
BLM-209ENST00000560559 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
BLM-209ENST00000560559 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
BLM-209ENST00000560559 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
BLM-209ENST00000560559 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
BLM-209ENST00000560559 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
BLM-209ENST00000560559 EVX2Q03828 476 aa13.53□□□□□ -0.24
BLM-209ENST00000560559 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
BLM-209ENST00000560559 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
BLM-209ENST00000560559 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
BLM-209ENST00000560559 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
BLM-209ENST00000560559 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
BLM-209ENST00000560559 GABBR2O75899 941 aa13.27□□□□□ -0.29
BLM-209ENST00000560559 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
BLM-209ENST00000560559 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
BLM-209ENST00000560559 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
BLM-209ENST00000560559 CLCN6P51797 869 aa13.11□□□□□ -0.31
BLM-209ENST00000560559 PROM2Q8N271 834 aa13.1□□□□□ -0.31
BLM-209ENST00000560559 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
BLM-209ENST00000560559 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
BLM-209ENST00000560559 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
BLM-209ENST00000560559 DCBLD2Q96PD2 775 aa12.99□□□□□ -0.33
BLM-209ENST00000560559 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
BLM-209ENST00000560559 MIER1Q8N108 512 aa12.94□□□□□ -0.34
BLM-209ENST00000560559 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
BLM-209ENST00000560559 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
BLM-209ENST00000560559 LHX8Q68G74 356 aa12.92□□□□□ -0.34
BLM-209ENST00000560559 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
BLM-209ENST00000560559 FKBP8Q14318 412 aa12.91□□□□□ -0.34
BLM-209ENST00000560559 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
BLM-209ENST00000560559 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
BLM-209ENST00000560559 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
BLM-209ENST00000560559 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms