RNA–Protein interactions for RNA: ENST00000560516.1

TRPM7-204, Transcript of transient receptor potential cation channel subfamily M member 7, humanhuman

TSL 3

Gene TRPM7, Length 732 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM7-204ENST00000560516 AEBP2Q6ZN18 517 aaPredicted RBP31.63■■■□□ 2.65
TRPM7-204ENST00000560516 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
TRPM7-204ENST00000560516 SENP3Q9H4L4 574 aaPredicted RBP27.04■■□□□ 1.92
TRPM7-204ENST00000560516 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
TRPM7-204ENST00000560516 FOXD1Q16676 465 aa25.2■■□□□ 1.62
TRPM7-204ENST00000560516 PLPPR3Q6T4P5 718 aa23.77■■□□□ 1.4
TRPM7-204ENST00000560516 MSH5O43196 834 aa23.69■■□□□ 1.38
TRPM7-204ENST00000560516 PIAS4Q8N2W9 510 aaPredicted RBP23.5■■□□□ 1.35
TRPM7-204ENST00000560516 POTEDQ86YR6 584 aa23.44■■□□□ 1.34
TRPM7-204ENST00000560516 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
TRPM7-204ENST00000560516 ADRA2BP18089 450 aa23.29■■□□□ 1.32
TRPM7-204ENST00000560516 MAPK8IP2Q13387 824 aaPredicted RBP21.45■■□□□ 1.02
TRPM7-204ENST00000560516 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
TRPM7-204ENST00000560516 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
TRPM7-204ENST00000560516 PPP4R3CPQ6ZMV5 832 aa20.79■□□□□ 0.92
TRPM7-204ENST00000560516 HOXD11P31277 338 aaPredicted RBP20.55■□□□□ 0.88
TRPM7-204ENST00000560516 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
TRPM7-204ENST00000560516 CNKSR2Q8WXI2 1034 aa20.47■□□□□ 0.87
TRPM7-204ENST00000560516 CACNB1Q02641 598 aaPredicted RBP20.42■□□□□ 0.86
TRPM7-204ENST00000560516 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
TRPM7-204ENST00000560516 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
TRPM7-204ENST00000560516 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
TRPM7-204ENST00000560516 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
TRPM7-204ENST00000560516 C1QBPQ07021 282 aaKnown RBP19.88■□□□□ 0.77
TRPM7-204ENST00000560516 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
TRPM7-204ENST00000560516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.72
TRPM7-204ENST00000560516 KCNA4P22459 653 aa19.24■□□□□ 0.67
TRPM7-204ENST00000560516 U3KPZ7 1027 aaPredicted RBP19.14■□□□□ 0.65
TRPM7-204ENST00000560516 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
TRPM7-204ENST00000560516 CAPN15O75808 1086 aa18.87■□□□□ 0.61
TRPM7-204ENST00000560516 DSG3P32926 999 aa18.83■□□□□ 0.6
TRPM7-204ENST00000560516 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
TRPM7-204ENST00000560516 APLP2Q06481 763 aa18.6■□□□□ 0.57
TRPM7-204ENST00000560516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
TRPM7-204ENST00000560516 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
TRPM7-204ENST00000560516 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
TRPM7-204ENST00000560516 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
TRPM7-204ENST00000560516 ABCB7O75027 752 aa18.42■□□□□ 0.54
TRPM7-204ENST00000560516 SAMD1Q6SPF0 538 aaPredicted RBP18.42■□□□□ 0.54
TRPM7-204ENST00000560516 POTEHQ6S545 545 aa18.33■□□□□ 0.52
TRPM7-204ENST00000560516 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
TRPM7-204ENST00000560516 MYCNP04198 464 aaPredicted RBP18.2■□□□□ 0.5
TRPM7-204ENST00000560516 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
TRPM7-204ENST00000560516 POLA2Q14181 598 aa17.98■□□□□ 0.47
TRPM7-204ENST00000560516 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
TRPM7-204ENST00000560516 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
TRPM7-204ENST00000560516 ZBTB22O15209 634 aa17.69■□□□□ 0.42
TRPM7-204ENST00000560516 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
TRPM7-204ENST00000560516 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
TRPM7-204ENST00000560516 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
TRPM7-204ENST00000560516 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
TRPM7-204ENST00000560516 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
TRPM7-204ENST00000560516 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
TRPM7-204ENST00000560516 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
TRPM7-204ENST00000560516 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
TRPM7-204ENST00000560516 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
TRPM7-204ENST00000560516 PITPNM1O00562 1244 aa17.17■□□□□ 0.34
TRPM7-204ENST00000560516 FBLN2P98095 1184 aa17.11■□□□□ 0.33
TRPM7-204ENST00000560516 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
TRPM7-204ENST00000560516 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
TRPM7-204ENST00000560516 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
TRPM7-204ENST00000560516 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRPM7-204ENST00000560516 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
TRPM7-204ENST00000560516 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
TRPM7-204ENST00000560516 HAX1O00165 279 aa16.92■□□□□ 0.3
TRPM7-204ENST00000560516 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
TRPM7-204ENST00000560516 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
TRPM7-204ENST00000560516 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
TRPM7-204ENST00000560516 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
TRPM7-204ENST00000560516 PRKAR2AP13861 404 aaKnown RBP16.72■□□□□ 0.27
TRPM7-204ENST00000560516 EVX2Q03828 476 aa16.68■□□□□ 0.26
TRPM7-204ENST00000560516 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRPM7-204ENST00000560516 C19orf67A6NJJ6 358 aa16.53■□□□□ 0.24
TRPM7-204ENST00000560516 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
TRPM7-204ENST00000560516 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
TRPM7-204ENST00000560516 GABBR2O75899 941 aa16.32■□□□□ 0.2
TRPM7-204ENST00000560516 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
TRPM7-204ENST00000560516 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
TRPM7-204ENST00000560516 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
TRPM7-204ENST00000560516 SPDYE4A6NLX3 237 aa16.05■□□□□ 0.16
TRPM7-204ENST00000560516 CLCN6P51797 869 aa16.03■□□□□ 0.16
TRPM7-204ENST00000560516 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
TRPM7-204ENST00000560516 LHX8Q68G74 356 aa16.02■□□□□ 0.16
TRPM7-204ENST00000560516 POTEIP0CG38 1075 aa15.97■□□□□ 0.15
TRPM7-204ENST00000560516 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
TRPM7-204ENST00000560516 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
TRPM7-204ENST00000560516 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
TRPM7-204ENST00000560516 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
TRPM7-204ENST00000560516 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
TRPM7-204ENST00000560516 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRPM7-204ENST00000560516 MNX1P50219 401 aaPredicted RBP15.73■□□□□ 0.11
TRPM7-204ENST00000560516 PHF12Q96QT6 1004 aa15.68■□□□□ 0.1
TRPM7-204ENST00000560516 PROM2Q8N271 834 aa15.67■□□□□ 0.1
TRPM7-204ENST00000560516 FKBP8Q14318 412 aa15.61■□□□□ 0.09
TRPM7-204ENST00000560516 MS4A3Q96HJ5 214 aa15.48■□□□□ 0.07
TRPM7-204ENST00000560516 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
TRPM7-204ENST00000560516 POTEB2H3BUK9 544 aa15.43■□□□□ 0.06
TRPM7-204ENST00000560516 OTUD5Q96G74 571 aa15.42■□□□□ 0.06
TRPM7-204ENST00000560516 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
TRPM7-204ENST00000560516 ASTLQ6HA08 431 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms