RNA–Protein interactions for RNA: ENST00000560306.1

LINC00933-204, long intergenic non-protein coding RNA 933, humanhuman

TSL 2

Gene LINC00933, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00933-204ENST00000560306 AEBP2Q6ZN18 517 aaPredicted RBP38.57■■■■□ 3.76
LINC00933-204ENST00000560306 CHIC1Q5VXU3 224 aa36.81■■■■□ 3.48
LINC00933-204ENST00000560306 SENP3Q9H4L4 574 aaPredicted RBP32.93■■■□□ 2.86
LINC00933-204ENST00000560306 PHF23Q9BUL5 403 aaPredicted RBP32.5■■■□□ 2.79
LINC00933-204ENST00000560306 FOXD1Q16676 465 aa30.64■■■□□ 2.5
LINC00933-204ENST00000560306 PLPPR3Q6T4P5 718 aa29.51■■■□□ 2.31
LINC00933-204ENST00000560306 PPP6R1Q9UPN7 881 aa28.74■■■□□ 2.19
LINC00933-204ENST00000560306 PIAS4Q8N2W9 510 aaPredicted RBP28.69■■■□□ 2.18
LINC00933-204ENST00000560306 ADRA2BP18089 450 aa28.67■■■□□ 2.18
LINC00933-204ENST00000560306 MSH5O43196 834 aa28.66■■■□□ 2.18
LINC00933-204ENST00000560306 POTEDQ86YR6 584 aa27.67■■■□□ 2.02
LINC00933-204ENST00000560306 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
LINC00933-204ENST00000560306 MAPK8IP2Q13387 824 aaPredicted RBP26.28■■□□□ 1.8
LINC00933-204ENST00000560306 DMRT2Q9Y5R5 561 aa26.12■■□□□ 1.77
LINC00933-204ENST00000560306 PPP4R3CPQ6ZMV5 832 aa25.86■■□□□ 1.73
LINC00933-204ENST00000560306 CNKSR2Q8WXI2 1034 aa25.36■■□□□ 1.65
LINC00933-204ENST00000560306 HOXD11P31277 338 aaPredicted RBP25.22■■□□□ 1.63
LINC00933-204ENST00000560306 RNF216Q9NWF9 866 aaPredicted RBP25.09■■□□□ 1.61
LINC00933-204ENST00000560306 DCAF8L1A6NGE4 600 aa25.06■■□□□ 1.6
LINC00933-204ENST00000560306 NCBP3Q53F19 620 aaKnown RBP24.95■■□□□ 1.58
LINC00933-204ENST00000560306 NPM3O75607 178 aaKnown RBP24.55■■□□□ 1.52
LINC00933-204ENST00000560306 CACNB1Q02641 598 aaPredicted RBP24.48■■□□□ 1.51
LINC00933-204ENST00000560306 RNF39Q9H2S5 420 aa24.44■■□□□ 1.5
LINC00933-204ENST00000560306 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
LINC00933-204ENST00000560306 KCNA4P22459 653 aa24.22■■□□□ 1.47
LINC00933-204ENST00000560306 C1QBPQ07021 282 aaKnown RBP24.11■■□□□ 1.45
LINC00933-204ENST00000560306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.44
LINC00933-204ENST00000560306 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
LINC00933-204ENST00000560306 SLC4A2P04920 1241 aa23.39■■□□□ 1.33
LINC00933-204ENST00000560306 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
LINC00933-204ENST00000560306 CAPN15O75808 1086 aa23.13■■□□□ 1.29
LINC00933-204ENST00000560306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
LINC00933-204ENST00000560306 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
LINC00933-204ENST00000560306 APLP2Q06481 763 aa22.97■■□□□ 1.27
LINC00933-204ENST00000560306 DSG3P32926 999 aa22.94■■□□□ 1.26
LINC00933-204ENST00000560306 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
LINC00933-204ENST00000560306 SAMD1Q6SPF0 538 aaPredicted RBP22.84■■□□□ 1.25
LINC00933-204ENST00000560306 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
LINC00933-204ENST00000560306 ZNF219Q9P2Y4 722 aaPredicted RBP22.79■■□□□ 1.24
LINC00933-204ENST00000560306 MYCNP04198 464 aaPredicted RBP22.74■■□□□ 1.23
LINC00933-204ENST00000560306 ABCB7O75027 752 aa22.59■■□□□ 1.21
LINC00933-204ENST00000560306 FOXD4L1Q9NU39 408 aa22.58■■□□□ 1.21
LINC00933-204ENST00000560306 ZBTB22O15209 634 aa22.24■■□□□ 1.15
LINC00933-204ENST00000560306 POLA2Q14181 598 aa22.2■■□□□ 1.14
LINC00933-204ENST00000560306 ATF5Q9Y2D1 282 aaPredicted RBP22.15■■□□□ 1.14
LINC00933-204ENST00000560306 RBM42Q9BTD8 480 aaKnown RBP21.93■■□□□ 1.1
LINC00933-204ENST00000560306 ATXN8OSP0DMR3 200 aa21.87■■□□□ 1.09
LINC00933-204ENST00000560306 ZBTB12Q9Y330 459 aaPredicted RBP21.81■■□□□ 1.08
LINC00933-204ENST00000560306 POTEHQ6S545 545 aa21.72■■□□□ 1.07
LINC00933-204ENST00000560306 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
LINC00933-204ENST00000560306 AKT1S1Q96B36 256 aa21.44■■□□□ 1.02
LINC00933-204ENST00000560306 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
LINC00933-204ENST00000560306 CHRDL2Q6WN34 429 aa21.35■■□□□ 1.01
LINC00933-204ENST00000560306 FBLN2P98095 1184 aa21.34■■□□□ 1.01
LINC00933-204ENST00000560306 REM2Q8IYK8 340 aaPredicted RBP21.21■□□□□ 0.99
LINC00933-204ENST00000560306 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
LINC00933-204ENST00000560306 MKRN4PQ13434 485 aaPredicted RBP21.14■□□□□ 0.97
LINC00933-204ENST00000560306 SPDYE2BA6NHP3 402 aa21.13■□□□□ 0.97
LINC00933-204ENST00000560306 SPDYE6P0CI01 402 aa21.13■□□□□ 0.97
LINC00933-204ENST00000560306 SPDYE2Q495Y8 402 aa21.13■□□□□ 0.97
LINC00933-204ENST00000560306 PITPNM1O00562 1244 aa20.99■□□□□ 0.95
LINC00933-204ENST00000560306 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
LINC00933-204ENST00000560306 PIP4P2Q8N4L2 257 aa20.86■□□□□ 0.93
LINC00933-204ENST00000560306 SSUH2Q9Y2M2 353 aa20.86■□□□□ 0.93
LINC00933-204ENST00000560306 FXR2P51116 673 aaKnown RBP eCLIP20.78■□□□□ 0.92
LINC00933-204ENST00000560306 SPDYE1Q8NFV5 336 aaPredicted RBP20.73■□□□□ 0.91
LINC00933-204ENST00000560306 CLEC11AQ9Y240 323 aa20.68■□□□□ 0.9
LINC00933-204ENST00000560306 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
LINC00933-204ENST00000560306 HAX1O00165 279 aa20.46■□□□□ 0.87
LINC00933-204ENST00000560306 PRKAR2AP13861 404 aaKnown RBP20.45■□□□□ 0.86
LINC00933-204ENST00000560306 SP7Q8TDD2 431 aaPredicted RBP20.45■□□□□ 0.86
LINC00933-204ENST00000560306 PRR29P0C7W0 189 aa20.36■□□□□ 0.85
LINC00933-204ENST00000560306 SPDYE4A6NLX3 237 aa20.26■□□□□ 0.83
LINC00933-204ENST00000560306 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
LINC00933-204ENST00000560306 EVX2Q03828 476 aa20.17■□□□□ 0.82
LINC00933-204ENST00000560306 C19orf67A6NJJ6 358 aa20.1■□□□□ 0.81
LINC00933-204ENST00000560306 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
LINC00933-204ENST00000560306 FARP1Q9Y4F1 1045 aaPredicted RBP19.97■□□□□ 0.79
LINC00933-204ENST00000560306 CREBZFQ9NS37 354 aa19.87■□□□□ 0.77
LINC00933-204ENST00000560306 CD44P16070 742 aaKnown RBP19.83■□□□□ 0.77
LINC00933-204ENST00000560306 PROM2Q8N271 834 aa19.78■□□□□ 0.76
LINC00933-204ENST00000560306 GABBR2O75899 941 aa19.76■□□□□ 0.75
LINC00933-204ENST00000560306 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
LINC00933-204ENST00000560306 NPM1P06748 294 aaKnown RBP eCLIP19.56■□□□□ 0.72
LINC00933-204ENST00000560306 CLCN6P51797 869 aa19.56■□□□□ 0.72
LINC00933-204ENST00000560306 MNX1P50219 401 aaPredicted RBP19.54■□□□□ 0.72
LINC00933-204ENST00000560306 ZNF579Q8NAF0 562 aaKnown RBP19.54■□□□□ 0.72
LINC00933-204ENST00000560306 PAK3O75914 559 aaPredicted RBP19.48■□□□□ 0.71
LINC00933-204ENST00000560306 FKBP8Q14318 412 aa19.41■□□□□ 0.7
LINC00933-204ENST00000560306 PLEKHG5O94827 1062 aa19.33■□□□□ 0.68
LINC00933-204ENST00000560306 POTEIP0CG38 1075 aa19.33■□□□□ 0.68
LINC00933-204ENST00000560306 MIER1Q8N108 512 aa19.3■□□□□ 0.68
LINC00933-204ENST00000560306 DCBLD2Q96PD2 775 aa19.3■□□□□ 0.68
LINC00933-204ENST00000560306 PHF12Q96QT6 1004 aa19.3■□□□□ 0.68
LINC00933-204ENST00000560306 GALR2O43603 387 aaPredicted RBP19.26■□□□□ 0.67
LINC00933-204ENST00000560306 PLCD3Q8N3E9 789 aa19.19■□□□□ 0.66
LINC00933-204ENST00000560306 LHX8Q68G74 356 aa19.18■□□□□ 0.66
LINC00933-204ENST00000560306 TSPYL2Q9H2G4 693 aaPredicted RBP19.18■□□□□ 0.66
LINC00933-204ENST00000560306 CCDC61Q9Y6R9 512 aa19.08■□□□□ 0.64
LINC00933-204ENST00000560306 MS4A3Q96HJ5 214 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms