RNA–Protein interactions for RNA: ENST00000560216.5

RNF111-210, Transcript of ring finger protein 111, humanhuman

TSL 4

Gene RNF111, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-210ENST00000560216 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
RNF111-210ENST00000560216 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
RNF111-210ENST00000560216 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
RNF111-210ENST00000560216 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
RNF111-210ENST00000560216 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
RNF111-210ENST00000560216 FOXD1Q16676 465 aa22.72■■□□□ 1.23
RNF111-210ENST00000560216 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
RNF111-210ENST00000560216 ADRA2BP18089 450 aa22■■□□□ 1.11
RNF111-210ENST00000560216 PIAS4Q8N2W9 510 aaPredicted RBP21.49■■□□□ 1.03
RNF111-210ENST00000560216 MSH5O43196 834 aa20.92■□□□□ 0.94
RNF111-210ENST00000560216 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
RNF111-210ENST00000560216 KCNA4P22459 653 aa20.24■□□□□ 0.83
RNF111-210ENST00000560216 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
RNF111-210ENST00000560216 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
RNF111-210ENST00000560216 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
RNF111-210ENST00000560216 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
RNF111-210ENST00000560216 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
RNF111-210ENST00000560216 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
RNF111-210ENST00000560216 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
RNF111-210ENST00000560216 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
RNF111-210ENST00000560216 HOXD11P31277 338 aaPredicted RBP19.32■□□□□ 0.68
RNF111-210ENST00000560216 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
RNF111-210ENST00000560216 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
RNF111-210ENST00000560216 DCAF8L1A6NGE4 600 aa18.72■□□□□ 0.59
RNF111-210ENST00000560216 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
RNF111-210ENST00000560216 ZBTB22O15209 634 aa18.61■□□□□ 0.57
RNF111-210ENST00000560216 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
RNF111-210ENST00000560216 FOXD4L1Q9NU39 408 aa18.6■□□□□ 0.57
RNF111-210ENST00000560216 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
RNF111-210ENST00000560216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
RNF111-210ENST00000560216 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
RNF111-210ENST00000560216 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
RNF111-210ENST00000560216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
RNF111-210ENST00000560216 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
RNF111-210ENST00000560216 ATXN8OSP0DMR3 200 aa17.97■□□□□ 0.47
RNF111-210ENST00000560216 SAMD1Q6SPF0 538 aaPredicted RBP17.95■□□□□ 0.46
RNF111-210ENST00000560216 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
RNF111-210ENST00000560216 APLP2Q06481 763 aa17.8■□□□□ 0.44
RNF111-210ENST00000560216 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
RNF111-210ENST00000560216 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
RNF111-210ENST00000560216 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
RNF111-210ENST00000560216 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
RNF111-210ENST00000560216 CAPN15O75808 1086 aa17.45■□□□□ 0.38
RNF111-210ENST00000560216 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
RNF111-210ENST00000560216 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
RNF111-210ENST00000560216 POLA2Q14181 598 aa17.18■□□□□ 0.34
RNF111-210ENST00000560216 DSG3P32926 999 aa17.12■□□□□ 0.33
RNF111-210ENST00000560216 ABCB7O75027 752 aa17.1■□□□□ 0.33
RNF111-210ENST00000560216 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
RNF111-210ENST00000560216 FBLN2P98095 1184 aa16.99■□□□□ 0.31
RNF111-210ENST00000560216 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
RNF111-210ENST00000560216 FKBP8Q14318 412 aa16.89■□□□□ 0.29
RNF111-210ENST00000560216 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
RNF111-210ENST00000560216 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
RNF111-210ENST00000560216 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
RNF111-210ENST00000560216 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
RNF111-210ENST00000560216 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
RNF111-210ENST00000560216 PROM2Q8N271 834 aa16.48■□□□□ 0.23
RNF111-210ENST00000560216 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
RNF111-210ENST00000560216 SSUH2Q9Y2M2 353 aa16.42■□□□□ 0.22
RNF111-210ENST00000560216 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
RNF111-210ENST00000560216 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
RNF111-210ENST00000560216 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
RNF111-210ENST00000560216 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
RNF111-210ENST00000560216 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
RNF111-210ENST00000560216 VASPP50552 380 aaPredicted RBP16.04■□□□□ 0.16
RNF111-210ENST00000560216 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
RNF111-210ENST00000560216 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
RNF111-210ENST00000560216 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
RNF111-210ENST00000560216 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
RNF111-210ENST00000560216 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
RNF111-210ENST00000560216 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
RNF111-210ENST00000560216 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
RNF111-210ENST00000560216 MIER1Q8N108 512 aa15.78■□□□□ 0.12
RNF111-210ENST00000560216 PRR29P0C7W0 189 aa15.77■□□□□ 0.12
RNF111-210ENST00000560216 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
RNF111-210ENST00000560216 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
RNF111-210ENST00000560216 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
RNF111-210ENST00000560216 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
RNF111-210ENST00000560216 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
RNF111-210ENST00000560216 CREBZFQ9NS37 354 aa15.61■□□□□ 0.09
RNF111-210ENST00000560216 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
RNF111-210ENST00000560216 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.07
RNF111-210ENST00000560216 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
RNF111-210ENST00000560216 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
RNF111-210ENST00000560216 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
RNF111-210ENST00000560216 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
RNF111-210ENST00000560216 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
RNF111-210ENST00000560216 NUBP1P53384 320 aa15.38■□□□□ 0.05
RNF111-210ENST00000560216 PKD2Q13563 968 aa15.37■□□□□ 0.05
RNF111-210ENST00000560216 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
RNF111-210ENST00000560216 GSE1Q14687 1217 aa15.3■□□□□ 0.04
RNF111-210ENST00000560216 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
RNF111-210ENST00000560216 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
RNF111-210ENST00000560216 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
RNF111-210ENST00000560216 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
RNF111-210ENST00000560216 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
RNF111-210ENST00000560216 DCAF8Q5TAQ9 597 aa15.23■□□□□ 0.03
RNF111-210ENST00000560216 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
RNF111-210ENST00000560216 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms