RNA–Protein interactions for RNA: ENST00000559806.5

LRRC49-220, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 744 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-220ENST00000559806 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
LRRC49-220ENST00000559806 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
LRRC49-220ENST00000559806 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
LRRC49-220ENST00000559806 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
LRRC49-220ENST00000559806 FOXD1Q16676 465 aa23.82■■□□□ 1.4
LRRC49-220ENST00000559806 POTEDQ86YR6 584 aa22.95■■□□□ 1.26
LRRC49-220ENST00000559806 MSH5O43196 834 aa22.42■■□□□ 1.18
LRRC49-220ENST00000559806 PIAS4Q8N2W9 510 aaPredicted RBP22.12■■□□□ 1.13
LRRC49-220ENST00000559806 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
LRRC49-220ENST00000559806 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
LRRC49-220ENST00000559806 ADRA2BP18089 450 aa21.8■■□□□ 1.08
LRRC49-220ENST00000559806 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
LRRC49-220ENST00000559806 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
LRRC49-220ENST00000559806 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
LRRC49-220ENST00000559806 CACNB1Q02641 598 aaPredicted RBP19.68■□□□□ 0.74
LRRC49-220ENST00000559806 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
LRRC49-220ENST00000559806 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
LRRC49-220ENST00000559806 RNF39Q9H2S5 420 aa19.12■□□□□ 0.65
LRRC49-220ENST00000559806 HOXD11P31277 338 aaPredicted RBP19.08■□□□□ 0.64
LRRC49-220ENST00000559806 CNKSR2Q8WXI2 1034 aa18.83■□□□□ 0.6
LRRC49-220ENST00000559806 RNF216Q9NWF9 866 aaPredicted RBP18.79■□□□□ 0.6
LRRC49-220ENST00000559806 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
LRRC49-220ENST00000559806 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
LRRC49-220ENST00000559806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.51
LRRC49-220ENST00000559806 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
LRRC49-220ENST00000559806 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
LRRC49-220ENST00000559806 POTEHQ6S545 545 aa17.86■□□□□ 0.45
LRRC49-220ENST00000559806 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
LRRC49-220ENST00000559806 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
LRRC49-220ENST00000559806 CAPN15O75808 1086 aa17.74■□□□□ 0.43
LRRC49-220ENST00000559806 DSG3P32926 999 aa17.73■□□□□ 0.43
LRRC49-220ENST00000559806 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
LRRC49-220ENST00000559806 ABCB7O75027 752 aa17.33■□□□□ 0.36
LRRC49-220ENST00000559806 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
LRRC49-220ENST00000559806 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
LRRC49-220ENST00000559806 KCNA4P22459 653 aa17.13■□□□□ 0.33
LRRC49-220ENST00000559806 APLP2Q06481 763 aa17.11■□□□□ 0.33
LRRC49-220ENST00000559806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
LRRC49-220ENST00000559806 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
LRRC49-220ENST00000559806 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
LRRC49-220ENST00000559806 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
LRRC49-220ENST00000559806 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
LRRC49-220ENST00000559806 POLA2Q14181 598 aa16.72■□□□□ 0.27
LRRC49-220ENST00000559806 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
LRRC49-220ENST00000559806 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
LRRC49-220ENST00000559806 AKT1S1Q96B36 256 aa16.38■□□□□ 0.21
LRRC49-220ENST00000559806 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
LRRC49-220ENST00000559806 PIP4P2Q8N4L2 257 aa16.29■□□□□ 0.2
LRRC49-220ENST00000559806 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
LRRC49-220ENST00000559806 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
LRRC49-220ENST00000559806 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
LRRC49-220ENST00000559806 HAX1O00165 279 aa16.17■□□□□ 0.18
LRRC49-220ENST00000559806 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
LRRC49-220ENST00000559806 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
LRRC49-220ENST00000559806 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.16
LRRC49-220ENST00000559806 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
LRRC49-220ENST00000559806 EVX2Q03828 476 aa15.98■□□□□ 0.15
LRRC49-220ENST00000559806 ZBTB22O15209 634 aa15.77■□□□□ 0.12
LRRC49-220ENST00000559806 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
LRRC49-220ENST00000559806 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
LRRC49-220ENST00000559806 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
LRRC49-220ENST00000559806 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
LRRC49-220ENST00000559806 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
LRRC49-220ENST00000559806 FBLN2P98095 1184 aa15.63■□□□□ 0.09
LRRC49-220ENST00000559806 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
LRRC49-220ENST00000559806 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
LRRC49-220ENST00000559806 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
LRRC49-220ENST00000559806 GABBR2O75899 941 aa15.52■□□□□ 0.08
LRRC49-220ENST00000559806 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
LRRC49-220ENST00000559806 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
LRRC49-220ENST00000559806 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
LRRC49-220ENST00000559806 LHX8Q68G74 356 aa15.45■□□□□ 0.06
LRRC49-220ENST00000559806 SSUH2Q9Y2M2 353 aa15.44■□□□□ 0.06
LRRC49-220ENST00000559806 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
LRRC49-220ENST00000559806 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
LRRC49-220ENST00000559806 POTEIP0CG38 1075 aa15.21■□□□□ 0.03
LRRC49-220ENST00000559806 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
LRRC49-220ENST00000559806 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
LRRC49-220ENST00000559806 PLSCR2Q9NRY7 297 aa15.02■□□□□ -0
LRRC49-220ENST00000559806 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
LRRC49-220ENST00000559806 CLCN6P51797 869 aa14.9□□□□□ -0.02
LRRC49-220ENST00000559806 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
LRRC49-220ENST00000559806 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
LRRC49-220ENST00000559806 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
LRRC49-220ENST00000559806 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
LRRC49-220ENST00000559806 OTUD5Q96G74 571 aa14.74□□□□□ -0.05
LRRC49-220ENST00000559806 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
LRRC49-220ENST00000559806 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
LRRC49-220ENST00000559806 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
LRRC49-220ENST00000559806 POTEMA6NI47 508 aa14.59□□□□□ -0.07
LRRC49-220ENST00000559806 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
LRRC49-220ENST00000559806 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
LRRC49-220ENST00000559806 POTEGQ6S5H5 508 aa14.54□□□□□ -0.08
LRRC49-220ENST00000559806 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
LRRC49-220ENST00000559806 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
LRRC49-220ENST00000559806 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
LRRC49-220ENST00000559806 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
LRRC49-220ENST00000559806 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
LRRC49-220ENST00000559806 POTEJP0CG39 1038 aa14.42□□□□□ -0.1
LRRC49-220ENST00000559806 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms