RNA–Protein interactions for RNA: ENST00000559685.5

LRRC49-219, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 758 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-219ENST00000559685 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
LRRC49-219ENST00000559685 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
LRRC49-219ENST00000559685 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
LRRC49-219ENST00000559685 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
LRRC49-219ENST00000559685 FOXD1Q16676 465 aa22.06■■□□□ 1.12
LRRC49-219ENST00000559685 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
LRRC49-219ENST00000559685 MSH5O43196 834 aa20.93■□□□□ 0.94
LRRC49-219ENST00000559685 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
LRRC49-219ENST00000559685 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
LRRC49-219ENST00000559685 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
LRRC49-219ENST00000559685 ADRA2BP18089 450 aa20.04■□□□□ 0.8
LRRC49-219ENST00000559685 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
LRRC49-219ENST00000559685 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
LRRC49-219ENST00000559685 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
LRRC49-219ENST00000559685 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
LRRC49-219ENST00000559685 DCAF8L1A6NGE4 600 aa17.89■□□□□ 0.45
LRRC49-219ENST00000559685 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
LRRC49-219ENST00000559685 HOXD11P31277 338 aaPredicted RBP17.7■□□□□ 0.42
LRRC49-219ENST00000559685 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
LRRC49-219ENST00000559685 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
LRRC49-219ENST00000559685 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
LRRC49-219ENST00000559685 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
LRRC49-219ENST00000559685 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
LRRC49-219ENST00000559685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
LRRC49-219ENST00000559685 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
LRRC49-219ENST00000559685 POTEHQ6S545 545 aa16.7■□□□□ 0.26
LRRC49-219ENST00000559685 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
LRRC49-219ENST00000559685 DSG3P32926 999 aa16.44■□□□□ 0.22
LRRC49-219ENST00000559685 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
LRRC49-219ENST00000559685 CAPN15O75808 1086 aa16.39■□□□□ 0.21
LRRC49-219ENST00000559685 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
LRRC49-219ENST00000559685 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
LRRC49-219ENST00000559685 APLP2Q06481 763 aa15.97■□□□□ 0.15
LRRC49-219ENST00000559685 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
LRRC49-219ENST00000559685 ABCB7O75027 752 aa15.92■□□□□ 0.14
LRRC49-219ENST00000559685 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
LRRC49-219ENST00000559685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
LRRC49-219ENST00000559685 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
LRRC49-219ENST00000559685 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
LRRC49-219ENST00000559685 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
LRRC49-219ENST00000559685 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
LRRC49-219ENST00000559685 KCNA4P22459 653 aa15.57■□□□□ 0.08
LRRC49-219ENST00000559685 POLA2Q14181 598 aa15.41■□□□□ 0.06
LRRC49-219ENST00000559685 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
LRRC49-219ENST00000559685 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
LRRC49-219ENST00000559685 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
LRRC49-219ENST00000559685 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
LRRC49-219ENST00000559685 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
LRRC49-219ENST00000559685 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
LRRC49-219ENST00000559685 HAX1O00165 279 aa15.02■□□□□ -0
LRRC49-219ENST00000559685 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
LRRC49-219ENST00000559685 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
LRRC49-219ENST00000559685 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
LRRC49-219ENST00000559685 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
LRRC49-219ENST00000559685 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
LRRC49-219ENST00000559685 EVX2Q03828 476 aa14.74□□□□□ -0.05
LRRC49-219ENST00000559685 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
LRRC49-219ENST00000559685 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
LRRC49-219ENST00000559685 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
LRRC49-219ENST00000559685 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
LRRC49-219ENST00000559685 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
LRRC49-219ENST00000559685 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
LRRC49-219ENST00000559685 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
LRRC49-219ENST00000559685 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
LRRC49-219ENST00000559685 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
LRRC49-219ENST00000559685 FBLN2P98095 1184 aa14.44□□□□□ -0.1
LRRC49-219ENST00000559685 LHX8Q68G74 356 aa14.42□□□□□ -0.1
LRRC49-219ENST00000559685 GABBR2O75899 941 aa14.41□□□□□ -0.1
LRRC49-219ENST00000559685 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
LRRC49-219ENST00000559685 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
LRRC49-219ENST00000559685 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
LRRC49-219ENST00000559685 ZBTB22O15209 634 aa14.27□□□□□ -0.13
LRRC49-219ENST00000559685 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
LRRC49-219ENST00000559685 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
LRRC49-219ENST00000559685 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
LRRC49-219ENST00000559685 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
LRRC49-219ENST00000559685 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
LRRC49-219ENST00000559685 CLCN6P51797 869 aa14.05□□□□□ -0.16
LRRC49-219ENST00000559685 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
LRRC49-219ENST00000559685 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
LRRC49-219ENST00000559685 PLSCR2Q9NRY7 297 aa13.99□□□□□ -0.17
LRRC49-219ENST00000559685 FARP1Q9Y4F1 1045 aaPredicted RBP13.96□□□□□ -0.17
LRRC49-219ENST00000559685 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
LRRC49-219ENST00000559685 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
LRRC49-219ENST00000559685 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
LRRC49-219ENST00000559685 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
LRRC49-219ENST00000559685 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
LRRC49-219ENST00000559685 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
LRRC49-219ENST00000559685 POTEMA6NI47 508 aa13.59□□□□□ -0.23
LRRC49-219ENST00000559685 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
LRRC49-219ENST00000559685 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
LRRC49-219ENST00000559685 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
LRRC49-219ENST00000559685 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
LRRC49-219ENST00000559685 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
LRRC49-219ENST00000559685 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
LRRC49-219ENST00000559685 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
LRRC49-219ENST00000559685 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
LRRC49-219ENST00000559685 C7P10643 843 aa13.34□□□□□ -0.27
LRRC49-219ENST00000559685 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
LRRC49-219ENST00000559685 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms