RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
AP3S2-210ENST00000559601 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
AP3S2-210ENST00000559601 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
AP3S2-210ENST00000559601 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
AP3S2-210ENST00000559601 FOXD1Q16676 465 aa19.94■□□□□ 0.78
AP3S2-210ENST00000559601 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
AP3S2-210ENST00000559601 MSH5O43196 834 aa18.79■□□□□ 0.6
AP3S2-210ENST00000559601 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
AP3S2-210ENST00000559601 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
AP3S2-210ENST00000559601 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
AP3S2-210ENST00000559601 ADRA2BP18089 450 aa18.24■□□□□ 0.51
AP3S2-210ENST00000559601 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
AP3S2-210ENST00000559601 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
AP3S2-210ENST00000559601 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
AP3S2-210ENST00000559601 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
AP3S2-210ENST00000559601 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
AP3S2-210ENST00000559601 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
AP3S2-210ENST00000559601 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
AP3S2-210ENST00000559601 RNF39Q9H2S5 420 aa16■□□□□ 0.15
AP3S2-210ENST00000559601 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
AP3S2-210ENST00000559601 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
AP3S2-210ENST00000559601 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
AP3S2-210ENST00000559601 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
AP3S2-210ENST00000559601 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
AP3S2-210ENST00000559601 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
AP3S2-210ENST00000559601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.04
AP3S2-210ENST00000559601 KCNA4P22459 653 aa15.1■□□□□ 0.01
AP3S2-210ENST00000559601 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
AP3S2-210ENST00000559601 POTEHQ6S545 545 aa14.91□□□□□ -0.02
AP3S2-210ENST00000559601 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
AP3S2-210ENST00000559601 CAPN15O75808 1086 aa14.86□□□□□ -0.03
AP3S2-210ENST00000559601 DSG3P32926 999 aa14.85□□□□□ -0.03
AP3S2-210ENST00000559601 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
AP3S2-210ENST00000559601 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
AP3S2-210ENST00000559601 ABCB7O75027 752 aa14.51□□□□□ -0.09
AP3S2-210ENST00000559601 APLP2Q06481 763 aa14.51□□□□□ -0.09
AP3S2-210ENST00000559601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
AP3S2-210ENST00000559601 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
AP3S2-210ENST00000559601 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
AP3S2-210ENST00000559601 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
AP3S2-210ENST00000559601 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
AP3S2-210ENST00000559601 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
AP3S2-210ENST00000559601 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
AP3S2-210ENST00000559601 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
AP3S2-210ENST00000559601 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
AP3S2-210ENST00000559601 POLA2Q14181 598 aa14.01□□□□□ -0.17
AP3S2-210ENST00000559601 ZBTB22O15209 634 aa13.89□□□□□ -0.19
AP3S2-210ENST00000559601 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
AP3S2-210ENST00000559601 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
AP3S2-210ENST00000559601 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
AP3S2-210ENST00000559601 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
AP3S2-210ENST00000559601 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
AP3S2-210ENST00000559601 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
AP3S2-210ENST00000559601 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
AP3S2-210ENST00000559601 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
AP3S2-210ENST00000559601 HAX1O00165 279 aa13.52□□□□□ -0.25
AP3S2-210ENST00000559601 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
AP3S2-210ENST00000559601 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
AP3S2-210ENST00000559601 FBLN2P98095 1184 aa13.39□□□□□ -0.27
AP3S2-210ENST00000559601 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
AP3S2-210ENST00000559601 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
AP3S2-210ENST00000559601 EVX2Q03828 476 aa13.33□□□□□ -0.28
AP3S2-210ENST00000559601 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
AP3S2-210ENST00000559601 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
AP3S2-210ENST00000559601 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
AP3S2-210ENST00000559601 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
AP3S2-210ENST00000559601 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
AP3S2-210ENST00000559601 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
AP3S2-210ENST00000559601 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
AP3S2-210ENST00000559601 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
AP3S2-210ENST00000559601 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
AP3S2-210ENST00000559601 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
AP3S2-210ENST00000559601 GABBR2O75899 941 aa12.98□□□□□ -0.33
AP3S2-210ENST00000559601 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
AP3S2-210ENST00000559601 LHX8Q68G74 356 aa12.9□□□□□ -0.34
AP3S2-210ENST00000559601 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
AP3S2-210ENST00000559601 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
AP3S2-210ENST00000559601 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
AP3S2-210ENST00000559601 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
AP3S2-210ENST00000559601 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
AP3S2-210ENST00000559601 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
AP3S2-210ENST00000559601 STAG3Q9UJ98 1225 aa12.64□□□□□ -0.39
AP3S2-210ENST00000559601 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
AP3S2-210ENST00000559601 CLCN6P51797 869 aa12.53□□□□□ -0.4
AP3S2-210ENST00000559601 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
AP3S2-210ENST00000559601 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
AP3S2-210ENST00000559601 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
AP3S2-210ENST00000559601 PROM2Q8N271 834 aa12.47□□□□□ -0.41
AP3S2-210ENST00000559601 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
AP3S2-210ENST00000559601 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
AP3S2-210ENST00000559601 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
AP3S2-210ENST00000559601 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
AP3S2-210ENST00000559601 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
AP3S2-210ENST00000559601 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
AP3S2-210ENST00000559601 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
AP3S2-210ENST00000559601 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
AP3S2-210ENST00000559601 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
AP3S2-210ENST00000559601 POTEMA6NI47 508 aa12.18□□□□□ -0.46
AP3S2-210ENST00000559601 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
AP3S2-210ENST00000559601 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms