RNA–Protein interactions for RNA: ENST00000559426.5

BLM-205, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 4

Gene BLM, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-205ENST00000559426 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
BLM-205ENST00000559426 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
BLM-205ENST00000559426 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
BLM-205ENST00000559426 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
BLM-205ENST00000559426 FOXD1Q16676 465 aa22.08■■□□□ 1.13
BLM-205ENST00000559426 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
BLM-205ENST00000559426 ADRA2BP18089 450 aa20.86■□□□□ 0.93
BLM-205ENST00000559426 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
BLM-205ENST00000559426 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
BLM-205ENST00000559426 MSH5O43196 834 aa20.64■□□□□ 0.89
BLM-205ENST00000559426 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
BLM-205ENST00000559426 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
BLM-205ENST00000559426 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
BLM-205ENST00000559426 MAPK8IP2Q13387 824 aaPredicted RBP19.03■□□□□ 0.64
BLM-205ENST00000559426 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
BLM-205ENST00000559426 KCNA4P22459 653 aa18.85■□□□□ 0.61
BLM-205ENST00000559426 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
BLM-205ENST00000559426 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
BLM-205ENST00000559426 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
BLM-205ENST00000559426 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
BLM-205ENST00000559426 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
BLM-205ENST00000559426 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
BLM-205ENST00000559426 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
BLM-205ENST00000559426 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
BLM-205ENST00000559426 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
BLM-205ENST00000559426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.4
BLM-205ENST00000559426 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
BLM-205ENST00000559426 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
BLM-205ENST00000559426 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
BLM-205ENST00000559426 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
BLM-205ENST00000559426 ZBTB22O15209 634 aa17.35■□□□□ 0.37
BLM-205ENST00000559426 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
BLM-205ENST00000559426 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
BLM-205ENST00000559426 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
BLM-205ENST00000559426 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
BLM-205ENST00000559426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
BLM-205ENST00000559426 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
BLM-205ENST00000559426 APLP2Q06481 763 aa16.86■□□□□ 0.29
BLM-205ENST00000559426 CAPN15O75808 1086 aa16.82■□□□□ 0.28
BLM-205ENST00000559426 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
BLM-205ENST00000559426 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
BLM-205ENST00000559426 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
BLM-205ENST00000559426 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
BLM-205ENST00000559426 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
BLM-205ENST00000559426 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
BLM-205ENST00000559426 DSG3P32926 999 aa16.57■□□□□ 0.24
BLM-205ENST00000559426 ABCB7O75027 752 aa16.41■□□□□ 0.22
BLM-205ENST00000559426 POLA2Q14181 598 aa16.22■□□□□ 0.19
BLM-205ENST00000559426 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
BLM-205ENST00000559426 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
BLM-205ENST00000559426 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
BLM-205ENST00000559426 FBLN2P98095 1184 aa15.86■□□□□ 0.13
BLM-205ENST00000559426 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
BLM-205ENST00000559426 FKBP8Q14318 412 aa15.6■□□□□ 0.09
BLM-205ENST00000559426 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
BLM-205ENST00000559426 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
BLM-205ENST00000559426 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
BLM-205ENST00000559426 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
BLM-205ENST00000559426 SPDYE2Q495Y8 402 aa15.5■□□□□ 0.07
BLM-205ENST00000559426 POTEHQ6S545 545 aa15.49■□□□□ 0.07
BLM-205ENST00000559426 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
BLM-205ENST00000559426 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
BLM-205ENST00000559426 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
BLM-205ENST00000559426 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
BLM-205ENST00000559426 PROM2Q8N271 834 aa15.31■□□□□ 0.04
BLM-205ENST00000559426 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
BLM-205ENST00000559426 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
BLM-205ENST00000559426 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
BLM-205ENST00000559426 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
BLM-205ENST00000559426 PIP4P2Q8N4L2 257 aa15.04■□□□□ -0
BLM-205ENST00000559426 FBXO3Q9UK99 471 aa15.02■□□□□ -0
BLM-205ENST00000559426 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
BLM-205ENST00000559426 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
BLM-205ENST00000559426 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
BLM-205ENST00000559426 PRKAR2AP13861 404 aaKnown RBP14.85□□□□□ -0.03
BLM-205ENST00000559426 VASPP50552 380 aaPredicted RBP14.82□□□□□ -0.04
BLM-205ENST00000559426 HAX1O00165 279 aa14.74□□□□□ -0.05
BLM-205ENST00000559426 MIER1Q8N108 512 aa14.74□□□□□ -0.05
BLM-205ENST00000559426 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
BLM-205ENST00000559426 PLCD3Q8N3E9 789 aa14.7□□□□□ -0.06
BLM-205ENST00000559426 CREBZFQ9NS37 354 aa14.68□□□□□ -0.06
BLM-205ENST00000559426 IFNLR1Q8IU57 520 aaPredicted RBP14.66□□□□□ -0.06
BLM-205ENST00000559426 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
BLM-205ENST00000559426 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
BLM-205ENST00000559426 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
BLM-205ENST00000559426 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
BLM-205ENST00000559426 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
BLM-205ENST00000559426 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
BLM-205ENST00000559426 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
BLM-205ENST00000559426 EVX2Q03828 476 aa14.45□□□□□ -0.1
BLM-205ENST00000559426 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
BLM-205ENST00000559426 CD44P16070 742 aaKnown RBP14.41□□□□□ -0.1
BLM-205ENST00000559426 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
BLM-205ENST00000559426 NUBP1P53384 320 aa14.37□□□□□ -0.11
BLM-205ENST00000559426 PAK3O75914 559 aaPredicted RBP14.3□□□□□ -0.12
BLM-205ENST00000559426 RASEFQ8IZ41 740 aa14.29□□□□□ -0.12
BLM-205ENST00000559426 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
BLM-205ENST00000559426 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
BLM-205ENST00000559426 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
BLM-205ENST00000559426 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms