RNA–Protein interactions for RNA: ENST00000559202.1

TMOD3-206, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-206ENST00000559202 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
TMOD3-206ENST00000559202 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
TMOD3-206ENST00000559202 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
TMOD3-206ENST00000559202 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
TMOD3-206ENST00000559202 FOXD1Q16676 465 aa15.7■□□□□ 0.1
TMOD3-206ENST00000559202 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
TMOD3-206ENST00000559202 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
TMOD3-206ENST00000559202 ADRA2BP18089 450 aa14.78□□□□□ -0.04
TMOD3-206ENST00000559202 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
TMOD3-206ENST00000559202 MSH5O43196 834 aa14.52□□□□□ -0.09
TMOD3-206ENST00000559202 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
TMOD3-206ENST00000559202 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
TMOD3-206ENST00000559202 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
TMOD3-206ENST00000559202 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
TMOD3-206ENST00000559202 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
TMOD3-206ENST00000559202 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
TMOD3-206ENST00000559202 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
TMOD3-206ENST00000559202 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
TMOD3-206ENST00000559202 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
TMOD3-206ENST00000559202 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
TMOD3-206ENST00000559202 KCNA4P22459 653 aa12.75□□□□□ -0.37
TMOD3-206ENST00000559202 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
TMOD3-206ENST00000559202 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
TMOD3-206ENST00000559202 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
TMOD3-206ENST00000559202 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
TMOD3-206ENST00000559202 CACNB1Q02641 598 aaPredicted RBP12.25□□□□□ -0.45
TMOD3-206ENST00000559202 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
TMOD3-206ENST00000559202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.45
TMOD3-206ENST00000559202 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
TMOD3-206ENST00000559202 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
TMOD3-206ENST00000559202 SPINK5Q9NQ38 1064 aaPredicted RBP11.89□□□□□ -0.51
TMOD3-206ENST00000559202 ZBTB22O15209 634 aa11.81□□□□□ -0.52
TMOD3-206ENST00000559202 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
TMOD3-206ENST00000559202 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
TMOD3-206ENST00000559202 DSG3P32926 999 aa11.76□□□□□ -0.53
TMOD3-206ENST00000559202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
TMOD3-206ENST00000559202 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
TMOD3-206ENST00000559202 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
TMOD3-206ENST00000559202 CAPN15O75808 1086 aa11.72□□□□□ -0.53
TMOD3-206ENST00000559202 APLP2Q06481 763 aa11.66□□□□□ -0.54
TMOD3-206ENST00000559202 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
TMOD3-206ENST00000559202 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
TMOD3-206ENST00000559202 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
TMOD3-206ENST00000559202 ABCB7O75027 752 aa11.51□□□□□ -0.57
TMOD3-206ENST00000559202 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
TMOD3-206ENST00000559202 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
TMOD3-206ENST00000559202 POLA2Q14181 598 aa11.39□□□□□ -0.59
TMOD3-206ENST00000559202 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
TMOD3-206ENST00000559202 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
TMOD3-206ENST00000559202 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
TMOD3-206ENST00000559202 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
TMOD3-206ENST00000559202 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
TMOD3-206ENST00000559202 AKT1S1Q96B36 256 aa10.95□□□□□ -0.66
TMOD3-206ENST00000559202 FBLN2P98095 1184 aa10.93□□□□□ -0.66
TMOD3-206ENST00000559202 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
TMOD3-206ENST00000559202 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
TMOD3-206ENST00000559202 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
TMOD3-206ENST00000559202 POTEHQ6S545 545 aa10.86□□□□□ -0.67
TMOD3-206ENST00000559202 REM2Q8IYK8 340 aaPredicted RBP10.86□□□□□ -0.67
TMOD3-206ENST00000559202 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
TMOD3-206ENST00000559202 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
TMOD3-206ENST00000559202 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
TMOD3-206ENST00000559202 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
TMOD3-206ENST00000559202 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
TMOD3-206ENST00000559202 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
TMOD3-206ENST00000559202 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
TMOD3-206ENST00000559202 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
TMOD3-206ENST00000559202 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
TMOD3-206ENST00000559202 PROM2Q8N271 834 aa10.52□□□□□ -0.73
TMOD3-206ENST00000559202 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
TMOD3-206ENST00000559202 PRKAR2AP13861 404 aaKnown RBP10.41□□□□□ -0.74
TMOD3-206ENST00000559202 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
TMOD3-206ENST00000559202 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
TMOD3-206ENST00000559202 EVX2Q03828 476 aa10.34□□□□□ -0.75
TMOD3-206ENST00000559202 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
TMOD3-206ENST00000559202 CREBZFQ9NS37 354 aa10.31□□□□□ -0.76
TMOD3-206ENST00000559202 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
TMOD3-206ENST00000559202 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
TMOD3-206ENST00000559202 HAX1O00165 279 aa10.26□□□□□ -0.77
TMOD3-206ENST00000559202 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
TMOD3-206ENST00000559202 MNX1P50219 401 aaPredicted RBP10.24□□□□□ -0.77
TMOD3-206ENST00000559202 FKBP8Q14318 412 aa10.22□□□□□ -0.77
TMOD3-206ENST00000559202 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
TMOD3-206ENST00000559202 GABBR2O75899 941 aa10.04□□□□□ -0.8
TMOD3-206ENST00000559202 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
TMOD3-206ENST00000559202 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
TMOD3-206ENST00000559202 ZRANB1Q9UGI0 708 aa9.96□□□□□ -0.82
TMOD3-206ENST00000559202 CLCN6P51797 869 aa9.94□□□□□ -0.82
TMOD3-206ENST00000559202 MIER1Q8N108 512 aa9.94□□□□□ -0.82
TMOD3-206ENST00000559202 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
TMOD3-206ENST00000559202 FBXO3Q9UK99 471 aa9.91□□□□□ -0.82
TMOD3-206ENST00000559202 NUBP1P53384 320 aa9.9□□□□□ -0.82
TMOD3-206ENST00000559202 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
TMOD3-206ENST00000559202 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
TMOD3-206ENST00000559202 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
TMOD3-206ENST00000559202 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
TMOD3-206ENST00000559202 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
TMOD3-206ENST00000559202 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
TMOD3-206ENST00000559202 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
TMOD3-206ENST00000559202 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms