RNA–Protein interactions for RNA: ENST00000559106.5

IDH3A-211, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-211ENST00000559106 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
IDH3A-211ENST00000559106 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
IDH3A-211ENST00000559106 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
IDH3A-211ENST00000559106 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
IDH3A-211ENST00000559106 FOXD1Q16676 465 aa13.88□□□□□ -0.19
IDH3A-211ENST00000559106 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
IDH3A-211ENST00000559106 MSH5O43196 834 aa13.14□□□□□ -0.31
IDH3A-211ENST00000559106 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
IDH3A-211ENST00000559106 PPP6R1Q9UPN7 881 aa12.89□□□□□ -0.35
IDH3A-211ENST00000559106 ADRA2BP18089 450 aa12.81□□□□□ -0.36
IDH3A-211ENST00000559106 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
IDH3A-211ENST00000559106 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
IDH3A-211ENST00000559106 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
IDH3A-211ENST00000559106 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
IDH3A-211ENST00000559106 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
IDH3A-211ENST00000559106 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
IDH3A-211ENST00000559106 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
IDH3A-211ENST00000559106 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
IDH3A-211ENST00000559106 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
IDH3A-211ENST00000559106 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
IDH3A-211ENST00000559106 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
IDH3A-211ENST00000559106 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
IDH3A-211ENST00000559106 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
IDH3A-211ENST00000559106 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
IDH3A-211ENST00000559106 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
IDH3A-211ENST00000559106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.687e-8■■■■□ 25
IDH3A-211ENST00000559106 KCNA4P22459 653 aa10.64□□□□□ -0.71
IDH3A-211ENST00000559106 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
IDH3A-211ENST00000559106 SLC4A2P04920 1241 aa10.46□□□□□ -0.73
IDH3A-211ENST00000559106 APLP2Q06481 763 aa10.45□□□□□ -0.74
IDH3A-211ENST00000559106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
IDH3A-211ENST00000559106 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
IDH3A-211ENST00000559106 DSG3P32926 999 aa10.4□□□□□ -0.74
IDH3A-211ENST00000559106 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
IDH3A-211ENST00000559106 CAPN15O75808 1086 aa10.36□□□□□ -0.75
IDH3A-211ENST00000559106 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
IDH3A-211ENST00000559106 SAMD1Q6SPF0 538 aaPredicted RBP10.32□□□□□ -0.76
IDH3A-211ENST00000559106 EHMT2Q96KQ7 1210 aa10.28□□□□□ -0.76
IDH3A-211ENST00000559106 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
IDH3A-211ENST00000559106 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
IDH3A-211ENST00000559106 SLC4A1APQ9BWU0 796 aaKnown RBP10.07□□□□□ -0.8
IDH3A-211ENST00000559106 ABCB7O75027 752 aa10.05□□□□□ -0.8
IDH3A-211ENST00000559106 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
IDH3A-211ENST00000559106 RBM42Q9BTD8 480 aaKnown RBP10.03□□□□□ -0.8
IDH3A-211ENST00000559106 POTEHQ6S545 545 aa10□□□□□ -0.81
IDH3A-211ENST00000559106 POLA2Q14181 598 aa9.93□□□□□ -0.82
IDH3A-211ENST00000559106 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
IDH3A-211ENST00000559106 CSRNP3Q8WYN3 585 aa9.9□□□□□ -0.82
IDH3A-211ENST00000559106 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
IDH3A-211ENST00000559106 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
IDH3A-211ENST00000559106 ZBTB22O15209 634 aa9.77□□□□□ -0.85
IDH3A-211ENST00000559106 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
IDH3A-211ENST00000559106 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
IDH3A-211ENST00000559106 OSCARQ8IYS5 282 aa9.61□□□□□ -0.87
IDH3A-211ENST00000559106 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
IDH3A-211ENST00000559106 SPDYE2BA6NHP3 402 aa9.55□□□□□ -0.88
IDH3A-211ENST00000559106 SPDYE6P0CI01 402 aa9.55□□□□□ -0.88
IDH3A-211ENST00000559106 FBLN2P98095 1184 aa9.55□□□□□ -0.88
IDH3A-211ENST00000559106 SPDYE2Q495Y8 402 aa9.55□□□□□ -0.88
IDH3A-211ENST00000559106 PITPNM1O00562 1244 aa9.47□□□□□ -0.89
IDH3A-211ENST00000559106 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
IDH3A-211ENST00000559106 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
IDH3A-211ENST00000559106 SSUH2Q9Y2M2 353 aa9.42□□□□□ -0.9
IDH3A-211ENST00000559106 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
IDH3A-211ENST00000559106 SP7Q8TDD2 431 aaPredicted RBP9.38□□□□□ -0.91
IDH3A-211ENST00000559106 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
IDH3A-211ENST00000559106 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
IDH3A-211ENST00000559106 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
IDH3A-211ENST00000559106 HAX1O00165 279 aa9.24□□□□□ -0.93
IDH3A-211ENST00000559106 RTN4Q9NQC3 1192 aaKnown RBP9.2□□□□□ -0.94
IDH3A-211ENST00000559106 PRKAR2AP13861 404 aaKnown RBP9.19□□□□□ -0.94
IDH3A-211ENST00000559106 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
IDH3A-211ENST00000559106 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
IDH3A-211ENST00000559106 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
IDH3A-211ENST00000559106 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
IDH3A-211ENST00000559106 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
IDH3A-211ENST00000559106 EVX2Q03828 476 aa9.08□□□□□ -0.96
IDH3A-211ENST00000559106 CLCN6P51797 869 aa9.06□□□□□ -0.96
IDH3A-211ENST00000559106 STAG3Q9UJ98 1225 aa9.05□□□□□ -0.96
IDH3A-211ENST00000559106 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
IDH3A-211ENST00000559106 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
IDH3A-211ENST00000559106 SPDYE4A6NLX3 237 aa8.96□□□□□ -0.98
IDH3A-211ENST00000559106 GABBR2O75899 941 aa8.96□□□□□ -0.98
IDH3A-211ENST00000559106 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
IDH3A-211ENST00000559106 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
IDH3A-211ENST00000559106 FKBP8Q14318 412 aa8.89□□□□□ -0.99
IDH3A-211ENST00000559106 PROM2Q8N271 834 aa8.89□□□□□ -0.99
IDH3A-211ENST00000559106 ZNF579Q8NAF0 562 aaKnown RBP8.88□□□□□ -0.99
IDH3A-211ENST00000559106 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
IDH3A-211ENST00000559106 MNX1P50219 401 aaPredicted RBP8.78□□□□□ -1
IDH3A-211ENST00000559106 LHX8Q68G74 356 aa8.77□□□□□ -1.01
IDH3A-211ENST00000559106 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
IDH3A-211ENST00000559106 ZRANB1Q9UGI0 708 aa8.76□□□□□ -1.01
IDH3A-211ENST00000559106 POTEIP0CG38 1075 aa8.75□□□□□ -1.01
IDH3A-211ENST00000559106 DCBLD2Q96PD2 775 aa8.7□□□□□ -1.02
IDH3A-211ENST00000559106 GALR2O43603 387 aaPredicted RBP8.64□□□□□ -1.03
IDH3A-211ENST00000559106 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
IDH3A-211ENST00000559106 PHF12Q96QT6 1004 aa8.6□□□□□ -1.03
IDH3A-211ENST00000559106 ASTLQ6HA08 431 aaPredicted RBP8.59□□□□□ -1.03
IDH3A-211ENST00000559106 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms