RNA–Protein interactions for RNA: ENST00000558808.5

LRRC49-213, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-213ENST00000558808 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
LRRC49-213ENST00000558808 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
LRRC49-213ENST00000558808 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
LRRC49-213ENST00000558808 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
LRRC49-213ENST00000558808 FOXD1Q16676 465 aa15.02■□□□□ -0
LRRC49-213ENST00000558808 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
LRRC49-213ENST00000558808 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
LRRC49-213ENST00000558808 ADRA2BP18089 450 aa14.24□□□□□ -0.13
LRRC49-213ENST00000558808 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
LRRC49-213ENST00000558808 MSH5O43196 834 aa14.13□□□□□ -0.15
LRRC49-213ENST00000558808 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
LRRC49-213ENST00000558808 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
LRRC49-213ENST00000558808 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
LRRC49-213ENST00000558808 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
LRRC49-213ENST00000558808 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.36
LRRC49-213ENST00000558808 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
LRRC49-213ENST00000558808 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
LRRC49-213ENST00000558808 KCNA4P22459 653 aa12.56□□□□□ -0.4
LRRC49-213ENST00000558808 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-213ENST00000558808 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-213ENST00000558808 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
LRRC49-213ENST00000558808 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
LRRC49-213ENST00000558808 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
LRRC49-213ENST00000558808 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
LRRC49-213ENST00000558808 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
LRRC49-213ENST00000558808 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
LRRC49-213ENST00000558808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
LRRC49-213ENST00000558808 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
LRRC49-213ENST00000558808 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
LRRC49-213ENST00000558808 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
LRRC49-213ENST00000558808 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
LRRC49-213ENST00000558808 ZBTB22O15209 634 aa11.56□□□□□ -0.56
LRRC49-213ENST00000558808 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
LRRC49-213ENST00000558808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
LRRC49-213ENST00000558808 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
LRRC49-213ENST00000558808 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
LRRC49-213ENST00000558808 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
LRRC49-213ENST00000558808 APLP2Q06481 763 aa11.41□□□□□ -0.58
LRRC49-213ENST00000558808 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
LRRC49-213ENST00000558808 CAPN15O75808 1086 aa11.38□□□□□ -0.59
LRRC49-213ENST00000558808 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
LRRC49-213ENST00000558808 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
LRRC49-213ENST00000558808 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
LRRC49-213ENST00000558808 DSG3P32926 999 aa11.23□□□□□ -0.61
LRRC49-213ENST00000558808 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
LRRC49-213ENST00000558808 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
LRRC49-213ENST00000558808 ABCB7O75027 752 aa11.14□□□□□ -0.63
LRRC49-213ENST00000558808 POLA2Q14181 598 aa11.06□□□□□ -0.64
LRRC49-213ENST00000558808 POTEHQ6S545 545 aa11.06□□□□□ -0.64
LRRC49-213ENST00000558808 ZBTB12Q9Y330 459 aaPredicted RBP10.88□□□□□ -0.67
LRRC49-213ENST00000558808 FBLN2P98095 1184 aa10.76□□□□□ -0.69
LRRC49-213ENST00000558808 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
LRRC49-213ENST00000558808 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
LRRC49-213ENST00000558808 RBM42Q9BTD8 480 aaKnown RBP10.71□□□□□ -0.69
LRRC49-213ENST00000558808 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
LRRC49-213ENST00000558808 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
LRRC49-213ENST00000558808 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
LRRC49-213ENST00000558808 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
LRRC49-213ENST00000558808 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
LRRC49-213ENST00000558808 ZNF692Q9BU19 519 aaPredicted RBP10.49□□□□□ -0.73
LRRC49-213ENST00000558808 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
LRRC49-213ENST00000558808 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
LRRC49-213ENST00000558808 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
LRRC49-213ENST00000558808 PABPN1Q86U42 306 aaKnown RBP eCLIP10.35□□□□□ -0.75
LRRC49-213ENST00000558808 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
LRRC49-213ENST00000558808 SPDYE1Q8NFV5 336 aaPredicted RBP10.3□□□□□ -0.76
LRRC49-213ENST00000558808 FKBP8Q14318 412 aa10.26□□□□□ -0.77
LRRC49-213ENST00000558808 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
LRRC49-213ENST00000558808 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
LRRC49-213ENST00000558808 PROM2Q8N271 834 aa10.24□□□□□ -0.77
LRRC49-213ENST00000558808 CLEC11AQ9Y240 323 aa10.24□□□□□ -0.77
LRRC49-213ENST00000558808 FXR2P51116 673 aaKnown RBP eCLIP10.16□□□□□ -0.78
LRRC49-213ENST00000558808 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
LRRC49-213ENST00000558808 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
LRRC49-213ENST00000558808 HAX1O00165 279 aa10.09□□□□□ -0.79
LRRC49-213ENST00000558808 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
LRRC49-213ENST00000558808 CHADLQ6NUI6 762 aa10.02□□□□□ -0.81
LRRC49-213ENST00000558808 EVX2Q03828 476 aa9.98□□□□□ -0.81
LRRC49-213ENST00000558808 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
LRRC49-213ENST00000558808 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
LRRC49-213ENST00000558808 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
LRRC49-213ENST00000558808 MIER1Q8N108 512 aa9.88□□□□□ -0.83
LRRC49-213ENST00000558808 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
LRRC49-213ENST00000558808 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
LRRC49-213ENST00000558808 C19orf67A6NJJ6 358 aa9.84□□□□□ -0.83
LRRC49-213ENST00000558808 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
LRRC49-213ENST00000558808 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
LRRC49-213ENST00000558808 NPM1P06748 294 aaKnown RBP eCLIP9.8□□□□□ -0.84
LRRC49-213ENST00000558808 CD44P16070 742 aaKnown RBP9.76□□□□□ -0.85
LRRC49-213ENST00000558808 ZBTB47Q9UFB7 747 aaPredicted RBP9.76□□□□□ -0.85
LRRC49-213ENST00000558808 GABBR2O75899 941 aa9.73□□□□□ -0.85
LRRC49-213ENST00000558808 PAK3O75914 559 aaPredicted RBP9.67□□□□□ -0.86
LRRC49-213ENST00000558808 IFNLR1Q8IU57 520 aaPredicted RBP9.67□□□□□ -0.86
LRRC49-213ENST00000558808 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
LRRC49-213ENST00000558808 ZRANB1Q9UGI0 708 aa9.67□□□□□ -0.86
LRRC49-213ENST00000558808 NUBP1P53384 320 aa9.66□□□□□ -0.86
LRRC49-213ENST00000558808 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
LRRC49-213ENST00000558808 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
LRRC49-213ENST00000558808 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
LRRC49-213ENST00000558808 LHX8Q68G74 356 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms