RNA–Protein interactions for RNA: ENST00000558807.1

NEO1-204, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-204ENST00000558807 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
NEO1-204ENST00000558807 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
NEO1-204ENST00000558807 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
NEO1-204ENST00000558807 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
NEO1-204ENST00000558807 FOXD1Q16676 465 aa16.94■□□□□ 0.3
NEO1-204ENST00000558807 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
NEO1-204ENST00000558807 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
NEO1-204ENST00000558807 ADRA2BP18089 450 aa15.98■□□□□ 0.15
NEO1-204ENST00000558807 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
NEO1-204ENST00000558807 MSH5O43196 834 aa15.75■□□□□ 0.11
NEO1-204ENST00000558807 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
NEO1-204ENST00000558807 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
NEO1-204ENST00000558807 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
NEO1-204ENST00000558807 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
NEO1-204ENST00000558807 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
NEO1-204ENST00000558807 KCNA4P22459 653 aa14.23□□□□□ -0.13
NEO1-204ENST00000558807 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
NEO1-204ENST00000558807 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
NEO1-204ENST00000558807 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
NEO1-204ENST00000558807 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
NEO1-204ENST00000558807 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
NEO1-204ENST00000558807 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
NEO1-204ENST00000558807 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
NEO1-204ENST00000558807 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
NEO1-204ENST00000558807 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
NEO1-204ENST00000558807 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
NEO1-204ENST00000558807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.27
NEO1-204ENST00000558807 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
NEO1-204ENST00000558807 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
NEO1-204ENST00000558807 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
NEO1-204ENST00000558807 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
NEO1-204ENST00000558807 ZBTB22O15209 634 aa13.11□□□□□ -0.31
NEO1-204ENST00000558807 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
NEO1-204ENST00000558807 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
NEO1-204ENST00000558807 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
NEO1-204ENST00000558807 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
NEO1-204ENST00000558807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
NEO1-204ENST00000558807 CAPN15O75808 1086 aa12.81□□□□□ -0.36
NEO1-204ENST00000558807 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
NEO1-204ENST00000558807 APLP2Q06481 763 aa12.75□□□□□ -0.37
NEO1-204ENST00000558807 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
NEO1-204ENST00000558807 DSG3P32926 999 aa12.7□□□□□ -0.38
NEO1-204ENST00000558807 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
NEO1-204ENST00000558807 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
NEO1-204ENST00000558807 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
NEO1-204ENST00000558807 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
NEO1-204ENST00000558807 ABCB7O75027 752 aa12.53□□□□□ -0.4
NEO1-204ENST00000558807 POLA2Q14181 598 aa12.38□□□□□ -0.43
NEO1-204ENST00000558807 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
NEO1-204ENST00000558807 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
NEO1-204ENST00000558807 FBLN2P98095 1184 aa12.03□□□□□ -0.48
NEO1-204ENST00000558807 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
NEO1-204ENST00000558807 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
NEO1-204ENST00000558807 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
NEO1-204ENST00000558807 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
NEO1-204ENST00000558807 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
NEO1-204ENST00000558807 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
NEO1-204ENST00000558807 FKBP8Q14318 412 aa11.77□□□□□ -0.53
NEO1-204ENST00000558807 POTEHQ6S545 545 aa11.77□□□□□ -0.53
NEO1-204ENST00000558807 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
NEO1-204ENST00000558807 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
NEO1-204ENST00000558807 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
NEO1-204ENST00000558807 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
NEO1-204ENST00000558807 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
NEO1-204ENST00000558807 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
NEO1-204ENST00000558807 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
NEO1-204ENST00000558807 PROM2Q8N271 834 aa11.55□□□□□ -0.56
NEO1-204ENST00000558807 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
NEO1-204ENST00000558807 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
NEO1-204ENST00000558807 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
NEO1-204ENST00000558807 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
NEO1-204ENST00000558807 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
NEO1-204ENST00000558807 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
NEO1-204ENST00000558807 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
NEO1-204ENST00000558807 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
NEO1-204ENST00000558807 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
NEO1-204ENST00000558807 HAX1O00165 279 aa11.22□□□□□ -0.61
NEO1-204ENST00000558807 VASPP50552 380 aaPredicted RBP11.2□□□□□ -0.62
NEO1-204ENST00000558807 SP7Q8TDD2 431 aaPredicted RBP11.15□□□□□ -0.62
NEO1-204ENST00000558807 EVX2Q03828 476 aa11.14□□□□□ -0.63
NEO1-204ENST00000558807 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
NEO1-204ENST00000558807 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
NEO1-204ENST00000558807 MIER1Q8N108 512 aa11.13□□□□□ -0.63
NEO1-204ENST00000558807 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
NEO1-204ENST00000558807 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
NEO1-204ENST00000558807 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
NEO1-204ENST00000558807 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
NEO1-204ENST00000558807 KLHL34Q8N239 644 aa11□□□□□ -0.65
NEO1-204ENST00000558807 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
NEO1-204ENST00000558807 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
NEO1-204ENST00000558807 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
NEO1-204ENST00000558807 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
NEO1-204ENST00000558807 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
NEO1-204ENST00000558807 GABBR2O75899 941 aa10.89□□□□□ -0.67
NEO1-204ENST00000558807 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
NEO1-204ENST00000558807 NUBP1P53384 320 aa10.86□□□□□ -0.67
NEO1-204ENST00000558807 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
NEO1-204ENST00000558807 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
NEO1-204ENST00000558807 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
NEO1-204ENST00000558807 CLCN6P51797 869 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms