RNA–Protein interactions for RNA: ENST00000558615.5

FAM227B-205, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 918 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-205ENST00000558615 AEBP2Q6ZN18 517 aaPredicted RBP33.35■■■□□ 2.93
FAM227B-205ENST00000558615 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
FAM227B-205ENST00000558615 SENP3Q9H4L4 574 aaPredicted RBP28.28■■■□□ 2.12
FAM227B-205ENST00000558615 PHF23Q9BUL5 403 aaPredicted RBP28■■■□□ 2.07
FAM227B-205ENST00000558615 FOXD1Q16676 465 aa26.43■■□□□ 1.82
FAM227B-205ENST00000558615 PLPPR3Q6T4P5 718 aa25.4■■□□□ 1.66
FAM227B-205ENST00000558615 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
FAM227B-205ENST00000558615 ADRA2BP18089 450 aa24.82■■□□□ 1.56
FAM227B-205ENST00000558615 PIAS4Q8N2W9 510 aaPredicted RBP24.72■■□□□ 1.55
FAM227B-205ENST00000558615 MSH5O43196 834 aa24.55■■□□□ 1.52
FAM227B-205ENST00000558615 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
FAM227B-205ENST00000558615 MAPK8IP2Q13387 824 aaPredicted RBP22.77■■□□□ 1.24
FAM227B-205ENST00000558615 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
FAM227B-205ENST00000558615 DMRT2Q9Y5R5 561 aa22.48■■□□□ 1.19
FAM227B-205ENST00000558615 PPP4R3CPQ6ZMV5 832 aa22.35■■□□□ 1.17
FAM227B-205ENST00000558615 CNKSR2Q8WXI2 1034 aa21.83■■□□□ 1.09
FAM227B-205ENST00000558615 HOXD11P31277 338 aaPredicted RBP21.71■■□□□ 1.07
FAM227B-205ENST00000558615 DCAF8L1A6NGE4 600 aa21.61■■□□□ 1.05
FAM227B-205ENST00000558615 RNF216Q9NWF9 866 aaPredicted RBP21.58■■□□□ 1.05
FAM227B-205ENST00000558615 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
FAM227B-205ENST00000558615 NPM3O75607 178 aaKnown RBP21.25■□□□□ 0.99
FAM227B-205ENST00000558615 KCNA4P22459 653 aa21.05■□□□□ 0.96
FAM227B-205ENST00000558615 CACNB1Q02641 598 aaPredicted RBP21.02■□□□□ 0.96
FAM227B-205ENST00000558615 RNF39Q9H2S5 420 aa21.02■□□□□ 0.96
FAM227B-205ENST00000558615 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
FAM227B-205ENST00000558615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.9
FAM227B-205ENST00000558615 C1QBPQ07021 282 aaKnown RBP20.66■□□□□ 0.9
FAM227B-205ENST00000558615 U3KPZ7 1027 aaPredicted RBP20.35■□□□□ 0.85
FAM227B-205ENST00000558615 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
FAM227B-205ENST00000558615 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
FAM227B-205ENST00000558615 CAPN15O75808 1086 aa19.92■□□□□ 0.78
FAM227B-205ENST00000558615 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
FAM227B-205ENST00000558615 DSG3P32926 999 aa19.76■□□□□ 0.75
FAM227B-205ENST00000558615 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
FAM227B-205ENST00000558615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
FAM227B-205ENST00000558615 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
FAM227B-205ENST00000558615 APLP2Q06481 763 aa19.61■□□□□ 0.73
FAM227B-205ENST00000558615 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
FAM227B-205ENST00000558615 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
FAM227B-205ENST00000558615 ABCB7O75027 752 aa19.55■□□□□ 0.72
FAM227B-205ENST00000558615 ZNF219Q9P2Y4 722 aaPredicted RBP19.55■□□□□ 0.72
FAM227B-205ENST00000558615 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
FAM227B-205ENST00000558615 ZBTB22O15209 634 aa19.4■□□□□ 0.7
FAM227B-205ENST00000558615 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
FAM227B-205ENST00000558615 POLA2Q14181 598 aa19.15■□□□□ 0.66
FAM227B-205ENST00000558615 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
FAM227B-205ENST00000558615 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
FAM227B-205ENST00000558615 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
FAM227B-205ENST00000558615 POTEHQ6S545 545 aa18.63■□□□□ 0.57
FAM227B-205ENST00000558615 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
FAM227B-205ENST00000558615 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
FAM227B-205ENST00000558615 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
FAM227B-205ENST00000558615 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
FAM227B-205ENST00000558615 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
FAM227B-205ENST00000558615 CHRDL2Q6WN34 429 aa18.35■□□□□ 0.53
FAM227B-205ENST00000558615 FBLN2P98095 1184 aa18.34■□□□□ 0.53
FAM227B-205ENST00000558615 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
FAM227B-205ENST00000558615 SPDYE2BA6NHP3 402 aa18.16■□□□□ 0.5
FAM227B-205ENST00000558615 SPDYE6P0CI01 402 aa18.16■□□□□ 0.5
FAM227B-205ENST00000558615 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
FAM227B-205ENST00000558615 PITPNM1O00562 1244 aa18.12■□□□□ 0.49
FAM227B-205ENST00000558615 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
FAM227B-205ENST00000558615 PIP4P2Q8N4L2 257 aa17.99■□□□□ 0.47
FAM227B-205ENST00000558615 SSUH2Q9Y2M2 353 aa17.99■□□□□ 0.47
FAM227B-205ENST00000558615 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
FAM227B-205ENST00000558615 CLEC11AQ9Y240 323 aa17.83■□□□□ 0.44
FAM227B-205ENST00000558615 SPDYE1Q8NFV5 336 aaPredicted RBP17.81■□□□□ 0.44
FAM227B-205ENST00000558615 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
FAM227B-205ENST00000558615 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
FAM227B-205ENST00000558615 HAX1O00165 279 aa17.58■□□□□ 0.4
FAM227B-205ENST00000558615 CHADLQ6NUI6 762 aa17.54■□□□□ 0.4
FAM227B-205ENST00000558615 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
FAM227B-205ENST00000558615 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
FAM227B-205ENST00000558615 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
FAM227B-205ENST00000558615 EVX2Q03828 476 aa17.48■□□□□ 0.39
FAM227B-205ENST00000558615 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
FAM227B-205ENST00000558615 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
FAM227B-205ENST00000558615 FARP1Q9Y4F1 1045 aaPredicted RBP17.21■□□□□ 0.35
FAM227B-205ENST00000558615 CREBZFQ9NS37 354 aa17.18■□□□□ 0.34
FAM227B-205ENST00000558615 PROM2Q8N271 834 aa17.11■□□□□ 0.33
FAM227B-205ENST00000558615 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
FAM227B-205ENST00000558615 GABBR2O75899 941 aa17.02■□□□□ 0.32
FAM227B-205ENST00000558615 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
FAM227B-205ENST00000558615 FKBP8Q14318 412 aa16.87■□□□□ 0.29
FAM227B-205ENST00000558615 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
FAM227B-205ENST00000558615 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
FAM227B-205ENST00000558615 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
FAM227B-205ENST00000558615 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
FAM227B-205ENST00000558615 PHF12Q96QT6 1004 aa16.72■□□□□ 0.27
FAM227B-205ENST00000558615 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
FAM227B-205ENST00000558615 MIER1Q8N108 512 aa16.67■□□□□ 0.26
FAM227B-205ENST00000558615 GALR2O43603 387 aaPredicted RBP16.65■□□□□ 0.26
FAM227B-205ENST00000558615 CLCN6P51797 869 aa16.62■□□□□ 0.25
FAM227B-205ENST00000558615 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
FAM227B-205ENST00000558615 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
FAM227B-205ENST00000558615 DCBLD2Q96PD2 775 aa16.55■□□□□ 0.24
FAM227B-205ENST00000558615 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
FAM227B-205ENST00000558615 RASEFQ8IZ41 740 aa16.5■□□□□ 0.23
FAM227B-205ENST00000558615 MS4A3Q96HJ5 214 aa16.47■□□□□ 0.23
FAM227B-205ENST00000558615 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms