RNA–Protein interactions for RNA: ENST00000558546.5

LRRC49-211, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-211ENST00000558546 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
LRRC49-211ENST00000558546 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
LRRC49-211ENST00000558546 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
LRRC49-211ENST00000558546 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
LRRC49-211ENST00000558546 FOXD1Q16676 465 aa18.67■□□□□ 0.58
LRRC49-211ENST00000558546 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
LRRC49-211ENST00000558546 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
LRRC49-211ENST00000558546 ADRA2BP18089 450 aa17.61■□□□□ 0.41
LRRC49-211ENST00000558546 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
LRRC49-211ENST00000558546 MSH5O43196 834 aa17.38■□□□□ 0.37
LRRC49-211ENST00000558546 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
LRRC49-211ENST00000558546 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
LRRC49-211ENST00000558546 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
LRRC49-211ENST00000558546 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
LRRC49-211ENST00000558546 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
LRRC49-211ENST00000558546 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
LRRC49-211ENST00000558546 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
LRRC49-211ENST00000558546 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
LRRC49-211ENST00000558546 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
LRRC49-211ENST00000558546 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
LRRC49-211ENST00000558546 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
LRRC49-211ENST00000558546 KCNA4P22459 653 aa15.2■□□□□ 0.02
LRRC49-211ENST00000558546 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
LRRC49-211ENST00000558546 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
LRRC49-211ENST00000558546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
LRRC49-211ENST00000558546 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
LRRC49-211ENST00000558546 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
LRRC49-211ENST00000558546 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
LRRC49-211ENST00000558546 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
LRRC49-211ENST00000558546 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
LRRC49-211ENST00000558546 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
LRRC49-211ENST00000558546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
LRRC49-211ENST00000558546 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
LRRC49-211ENST00000558546 CAPN15O75808 1086 aa14.14□□□□□ -0.15
LRRC49-211ENST00000558546 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
LRRC49-211ENST00000558546 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
LRRC49-211ENST00000558546 APLP2Q06481 763 aa14.11□□□□□ -0.15
LRRC49-211ENST00000558546 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
LRRC49-211ENST00000558546 DSG3P32926 999 aa13.99□□□□□ -0.17
LRRC49-211ENST00000558546 ZBTB22O15209 634 aa13.98□□□□□ -0.17
LRRC49-211ENST00000558546 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
LRRC49-211ENST00000558546 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
LRRC49-211ENST00000558546 ABCB7O75027 752 aa13.85□□□□□ -0.19
LRRC49-211ENST00000558546 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
LRRC49-211ENST00000558546 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
LRRC49-211ENST00000558546 POLA2Q14181 598 aa13.64□□□□□ -0.23
LRRC49-211ENST00000558546 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
LRRC49-211ENST00000558546 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
LRRC49-211ENST00000558546 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
LRRC49-211ENST00000558546 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
LRRC49-211ENST00000558546 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
LRRC49-211ENST00000558546 FBLN2P98095 1184 aa13.2□□□□□ -0.3
LRRC49-211ENST00000558546 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
LRRC49-211ENST00000558546 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
LRRC49-211ENST00000558546 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
LRRC49-211ENST00000558546 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
LRRC49-211ENST00000558546 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
LRRC49-211ENST00000558546 POTEHQ6S545 545 aa12.98□□□□□ -0.33
LRRC49-211ENST00000558546 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
LRRC49-211ENST00000558546 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
LRRC49-211ENST00000558546 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
LRRC49-211ENST00000558546 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
LRRC49-211ENST00000558546 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
LRRC49-211ENST00000558546 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
LRRC49-211ENST00000558546 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
LRRC49-211ENST00000558546 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
LRRC49-211ENST00000558546 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
LRRC49-211ENST00000558546 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
LRRC49-211ENST00000558546 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
LRRC49-211ENST00000558546 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
LRRC49-211ENST00000558546 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
LRRC49-211ENST00000558546 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
LRRC49-211ENST00000558546 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
LRRC49-211ENST00000558546 PROM2Q8N271 834 aa12.41□□□□□ -0.42
LRRC49-211ENST00000558546 HAX1O00165 279 aa12.37□□□□□ -0.43
LRRC49-211ENST00000558546 FKBP8Q14318 412 aa12.3□□□□□ -0.44
LRRC49-211ENST00000558546 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
LRRC49-211ENST00000558546 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
LRRC49-211ENST00000558546 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
LRRC49-211ENST00000558546 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
LRRC49-211ENST00000558546 EVX2Q03828 476 aa12.24□□□□□ -0.45
LRRC49-211ENST00000558546 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
LRRC49-211ENST00000558546 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
LRRC49-211ENST00000558546 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
LRRC49-211ENST00000558546 MIER1Q8N108 512 aa12.01□□□□□ -0.49
LRRC49-211ENST00000558546 PLEKHG5O94827 1062 aa12□□□□□ -0.49
LRRC49-211ENST00000558546 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
LRRC49-211ENST00000558546 GABBR2O75899 941 aa11.99□□□□□ -0.49
LRRC49-211ENST00000558546 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
LRRC49-211ENST00000558546 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
LRRC49-211ENST00000558546 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
LRRC49-211ENST00000558546 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
LRRC49-211ENST00000558546 CLCN6P51797 869 aa11.89□□□□□ -0.51
LRRC49-211ENST00000558546 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
LRRC49-211ENST00000558546 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
LRRC49-211ENST00000558546 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
LRRC49-211ENST00000558546 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
LRRC49-211ENST00000558546 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
LRRC49-211ENST00000558546 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
LRRC49-211ENST00000558546 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms