RNA–Protein interactions for RNA: ENST00000558495.1

RCOR1-202, Transcript of REST corepressor 1, humanhuman

TSL 3

Gene RCOR1, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR1-202ENST00000558495 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
RCOR1-202ENST00000558495 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
RCOR1-202ENST00000558495 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
RCOR1-202ENST00000558495 PHF23Q9BUL5 403 aaPredicted RBP25.11■■□□□ 1.61
RCOR1-202ENST00000558495 FOXD1Q16676 465 aa23.69■■□□□ 1.38
RCOR1-202ENST00000558495 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
RCOR1-202ENST00000558495 MSH5O43196 834 aa22.25■■□□□ 1.15
RCOR1-202ENST00000558495 PIAS4Q8N2W9 510 aaPredicted RBP22.17■■□□□ 1.14
RCOR1-202ENST00000558495 PPP6R1Q9UPN7 881 aa22.08■■□□□ 1.13
RCOR1-202ENST00000558495 ADRA2BP18089 450 aa22.06■■□□□ 1.12
RCOR1-202ENST00000558495 POTEDQ86YR6 584 aa21.79■■□□□ 1.08
RCOR1-202ENST00000558495 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
RCOR1-202ENST00000558495 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
RCOR1-202ENST00000558495 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
RCOR1-202ENST00000558495 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
RCOR1-202ENST00000558495 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
RCOR1-202ENST00000558495 CNKSR2Q8WXI2 1034 aa19.4■□□□□ 0.7
RCOR1-202ENST00000558495 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
RCOR1-202ENST00000558495 RNF216Q9NWF9 866 aaPredicted RBP19.22■□□□□ 0.67
RCOR1-202ENST00000558495 CACNB1Q02641 598 aaPredicted RBP19.2■□□□□ 0.66
RCOR1-202ENST00000558495 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
RCOR1-202ENST00000558495 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
RCOR1-202ENST00000558495 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
RCOR1-202ENST00000558495 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
RCOR1-202ENST00000558495 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
RCOR1-202ENST00000558495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.565e-6■□□□□ 11.1
RCOR1-202ENST00000558495 KCNA4P22459 653 aa18.25■□□□□ 0.51
RCOR1-202ENST00000558495 U3KPZ7 1027 aaPredicted RBP18.05■□□□□ 0.48
RCOR1-202ENST00000558495 CAPN15O75808 1086 aa17.9■□□□□ 0.46
RCOR1-202ENST00000558495 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
RCOR1-202ENST00000558495 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
RCOR1-202ENST00000558495 DSG3P32926 999 aa17.71■□□□□ 0.43
RCOR1-202ENST00000558495 APLP2Q06481 763 aa17.66■□□□□ 0.42
RCOR1-202ENST00000558495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
RCOR1-202ENST00000558495 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
RCOR1-202ENST00000558495 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
RCOR1-202ENST00000558495 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
RCOR1-202ENST00000558495 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
RCOR1-202ENST00000558495 ABCB7O75027 752 aa17.45■□□□□ 0.38
RCOR1-202ENST00000558495 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
RCOR1-202ENST00000558495 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
RCOR1-202ENST00000558495 POTEHQ6S545 545 aa17.1■□□□□ 0.33
RCOR1-202ENST00000558495 POLA2Q14181 598 aa17.07■□□□□ 0.32
RCOR1-202ENST00000558495 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
RCOR1-202ENST00000558495 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
RCOR1-202ENST00000558495 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
RCOR1-202ENST00000558495 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
RCOR1-202ENST00000558495 ZBTB22O15209 634 aa16.7■□□□□ 0.26
RCOR1-202ENST00000558495 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
RCOR1-202ENST00000558495 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
RCOR1-202ENST00000558495 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
RCOR1-202ENST00000558495 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
RCOR1-202ENST00000558495 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
RCOR1-202ENST00000558495 FBLN2P98095 1184 aa16.33■□□□□ 0.2
RCOR1-202ENST00000558495 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
RCOR1-202ENST00000558495 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
RCOR1-202ENST00000558495 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
RCOR1-202ENST00000558495 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
RCOR1-202ENST00000558495 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
RCOR1-202ENST00000558495 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
RCOR1-202ENST00000558495 FXR2P51116 673 aaKnown RBP eCLIP16.04■□□□□ 0.16
RCOR1-202ENST00000558495 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
RCOR1-202ENST00000558495 HAX1O00165 279 aa15.99■□□□□ 0.15
RCOR1-202ENST00000558495 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
RCOR1-202ENST00000558495 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
RCOR1-202ENST00000558495 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
RCOR1-202ENST00000558495 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
RCOR1-202ENST00000558495 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
RCOR1-202ENST00000558495 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
RCOR1-202ENST00000558495 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
RCOR1-202ENST00000558495 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
RCOR1-202ENST00000558495 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
RCOR1-202ENST00000558495 EVX2Q03828 476 aa15.66■□□□□ 0.1
RCOR1-202ENST00000558495 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
RCOR1-202ENST00000558495 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
RCOR1-202ENST00000558495 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
RCOR1-202ENST00000558495 GABBR2O75899 941 aa15.36■□□□□ 0.05
RCOR1-202ENST00000558495 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
RCOR1-202ENST00000558495 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
RCOR1-202ENST00000558495 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
RCOR1-202ENST00000558495 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
RCOR1-202ENST00000558495 CLCN6P51797 869 aa15.12■□□□□ 0.01
RCOR1-202ENST00000558495 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
RCOR1-202ENST00000558495 LHX8Q68G74 356 aa15.03■□□□□ -0
RCOR1-202ENST00000558495 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
RCOR1-202ENST00000558495 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
RCOR1-202ENST00000558495 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
RCOR1-202ENST00000558495 DCBLD2Q96PD2 775 aa15.01□□□□□ -0.01
RCOR1-202ENST00000558495 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
RCOR1-202ENST00000558495 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
RCOR1-202ENST00000558495 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
RCOR1-202ENST00000558495 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
RCOR1-202ENST00000558495 PROM2Q8N271 834 aa14.83□□□□□ -0.04
RCOR1-202ENST00000558495 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
RCOR1-202ENST00000558495 MIER1Q8N108 512 aa14.73□□□□□ -0.05
RCOR1-202ENST00000558495 TSPYL2Q9H2G4 693 aaPredicted RBP14.72□□□□□ -0.05
RCOR1-202ENST00000558495 MS4A3Q96HJ5 214 aa14.63□□□□□ -0.07
RCOR1-202ENST00000558495 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
RCOR1-202ENST00000558495 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
RCOR1-202ENST00000558495 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms