RNA–Protein interactions for RNA: ENST00000558456.5

LRRC49-210, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-210ENST00000558456 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
LRRC49-210ENST00000558456 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
LRRC49-210ENST00000558456 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
LRRC49-210ENST00000558456 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
LRRC49-210ENST00000558456 FOXD1Q16676 465 aa16.82■□□□□ 0.28
LRRC49-210ENST00000558456 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
LRRC49-210ENST00000558456 PPP6R1Q9UPN7 881 aa15.8■□□□□ 0.12
LRRC49-210ENST00000558456 ADRA2BP18089 450 aa15.74■□□□□ 0.11
LRRC49-210ENST00000558456 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
LRRC49-210ENST00000558456 MSH5O43196 834 aa15.68■□□□□ 0.1
LRRC49-210ENST00000558456 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
LRRC49-210ENST00000558456 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
LRRC49-210ENST00000558456 SCAF1Q9H7N4 1312 aaKnown RBP14.33□□□□□ -0.12
LRRC49-210ENST00000558456 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
LRRC49-210ENST00000558456 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
LRRC49-210ENST00000558456 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
LRRC49-210ENST00000558456 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
LRRC49-210ENST00000558456 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
LRRC49-210ENST00000558456 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
LRRC49-210ENST00000558456 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
LRRC49-210ENST00000558456 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
LRRC49-210ENST00000558456 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
LRRC49-210ENST00000558456 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
LRRC49-210ENST00000558456 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
LRRC49-210ENST00000558456 KCNA4P22459 653 aa13.24□□□□□ -0.29
LRRC49-210ENST00000558456 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
LRRC49-210ENST00000558456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRRC49-210ENST00000558456 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
LRRC49-210ENST00000558456 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
LRRC49-210ENST00000558456 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-210ENST00000558456 CAPN15O75808 1086 aa12.68□□□□□ -0.38
LRRC49-210ENST00000558456 DSG3P32926 999 aa12.59□□□□□ -0.39
LRRC49-210ENST00000558456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
LRRC49-210ENST00000558456 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
LRRC49-210ENST00000558456 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
LRRC49-210ENST00000558456 APLP2Q06481 763 aa12.48□□□□□ -0.41
LRRC49-210ENST00000558456 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
LRRC49-210ENST00000558456 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-210ENST00000558456 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-210ENST00000558456 ABCB7O75027 752 aa12.41□□□□□ -0.42
LRRC49-210ENST00000558456 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
LRRC49-210ENST00000558456 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
LRRC49-210ENST00000558456 ZBTB22O15209 634 aa12.19□□□□□ -0.46
LRRC49-210ENST00000558456 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
LRRC49-210ENST00000558456 POLA2Q14181 598 aa12.16□□□□□ -0.46
LRRC49-210ENST00000558456 POTEHQ6S545 545 aa11.96□□□□□ -0.49
LRRC49-210ENST00000558456 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
LRRC49-210ENST00000558456 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
LRRC49-210ENST00000558456 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
LRRC49-210ENST00000558456 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
LRRC49-210ENST00000558456 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
LRRC49-210ENST00000558456 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
LRRC49-210ENST00000558456 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
LRRC49-210ENST00000558456 FBLN2P98095 1184 aa11.62□□□□□ -0.55
LRRC49-210ENST00000558456 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
LRRC49-210ENST00000558456 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
LRRC49-210ENST00000558456 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
LRRC49-210ENST00000558456 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
LRRC49-210ENST00000558456 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
LRRC49-210ENST00000558456 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
LRRC49-210ENST00000558456 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
LRRC49-210ENST00000558456 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
LRRC49-210ENST00000558456 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
LRRC49-210ENST00000558456 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
LRRC49-210ENST00000558456 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
LRRC49-210ENST00000558456 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
LRRC49-210ENST00000558456 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
LRRC49-210ENST00000558456 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
LRRC49-210ENST00000558456 HAX1O00165 279 aa11.23□□□□□ -0.61
LRRC49-210ENST00000558456 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
LRRC49-210ENST00000558456 PRKAR2AP13861 404 aaKnown RBP11.21□□□□□ -0.61
LRRC49-210ENST00000558456 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
LRRC49-210ENST00000558456 EVX2Q03828 476 aa11.13□□□□□ -0.63
LRRC49-210ENST00000558456 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
LRRC49-210ENST00000558456 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
LRRC49-210ENST00000558456 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
LRRC49-210ENST00000558456 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
LRRC49-210ENST00000558456 STAG3Q9UJ98 1225 aa10.92□□□□□ -0.66
LRRC49-210ENST00000558456 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
LRRC49-210ENST00000558456 GABBR2O75899 941 aa10.86□□□□□ -0.67
LRRC49-210ENST00000558456 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
LRRC49-210ENST00000558456 PROM2Q8N271 834 aa10.78□□□□□ -0.68
LRRC49-210ENST00000558456 ZRANB1Q9UGI0 708 aa10.72□□□□□ -0.69
LRRC49-210ENST00000558456 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
LRRC49-210ENST00000558456 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
LRRC49-210ENST00000558456 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
LRRC49-210ENST00000558456 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
LRRC49-210ENST00000558456 CLCN6P51797 869 aa10.62□□□□□ -0.71
LRRC49-210ENST00000558456 PAK3O75914 559 aaPredicted RBP10.6□□□□□ -0.71
LRRC49-210ENST00000558456 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
LRRC49-210ENST00000558456 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
LRRC49-210ENST00000558456 FKBP8Q14318 412 aa10.58□□□□□ -0.72
LRRC49-210ENST00000558456 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
LRRC49-210ENST00000558456 LHX8Q68G74 356 aa10.54□□□□□ -0.72
LRRC49-210ENST00000558456 MIER1Q8N108 512 aa10.53□□□□□ -0.72
LRRC49-210ENST00000558456 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
LRRC49-210ENST00000558456 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
LRRC49-210ENST00000558456 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
LRRC49-210ENST00000558456 MS4A3Q96HJ5 214 aa10.44□□□□□ -0.74
LRRC49-210ENST00000558456 CCDC61Q9Y6R9 512 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms