RNA–Protein interactions for RNA: ENST00000558137.5

LRRC49-207, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 636 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-207ENST00000558137 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
LRRC49-207ENST00000558137 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
LRRC49-207ENST00000558137 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
LRRC49-207ENST00000558137 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
LRRC49-207ENST00000558137 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
LRRC49-207ENST00000558137 FOXD1Q16676 465 aa15.82■□□□□ 0.12
LRRC49-207ENST00000558137 ADRA2BP18089 450 aa15.3■□□□□ 0.04
LRRC49-207ENST00000558137 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
LRRC49-207ENST00000558137 PIAS4Q8N2W9 510 aaPredicted RBP14.99□□□□□ -0.01
LRRC49-207ENST00000558137 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
LRRC49-207ENST00000558137 MSH5O43196 834 aa14.6□□□□□ -0.07
LRRC49-207ENST00000558137 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
LRRC49-207ENST00000558137 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
LRRC49-207ENST00000558137 KCNA4P22459 653 aa14.04□□□□□ -0.16
LRRC49-207ENST00000558137 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
LRRC49-207ENST00000558137 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
LRRC49-207ENST00000558137 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
LRRC49-207ENST00000558137 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
LRRC49-207ENST00000558137 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
LRRC49-207ENST00000558137 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
LRRC49-207ENST00000558137 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
LRRC49-207ENST00000558137 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
LRRC49-207ENST00000558137 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
LRRC49-207ENST00000558137 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
LRRC49-207ENST00000558137 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
LRRC49-207ENST00000558137 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
LRRC49-207ENST00000558137 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
LRRC49-207ENST00000558137 ZBTB22O15209 634 aa12.9□□□□□ -0.34
LRRC49-207ENST00000558137 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
LRRC49-207ENST00000558137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
LRRC49-207ENST00000558137 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
LRRC49-207ENST00000558137 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
LRRC49-207ENST00000558137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
LRRC49-207ENST00000558137 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
LRRC49-207ENST00000558137 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
LRRC49-207ENST00000558137 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
LRRC49-207ENST00000558137 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
LRRC49-207ENST00000558137 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
LRRC49-207ENST00000558137 APLP2Q06481 763 aa12.4□□□□□ -0.42
LRRC49-207ENST00000558137 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
LRRC49-207ENST00000558137 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
LRRC49-207ENST00000558137 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
LRRC49-207ENST00000558137 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
LRRC49-207ENST00000558137 CAPN15O75808 1086 aa12.18□□□□□ -0.46
LRRC49-207ENST00000558137 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
LRRC49-207ENST00000558137 POLA2Q14181 598 aa11.96□□□□□ -0.49
LRRC49-207ENST00000558137 ABCB7O75027 752 aa11.94□□□□□ -0.5
LRRC49-207ENST00000558137 DSG3P32926 999 aa11.92□□□□□ -0.5
LRRC49-207ENST00000558137 FBLN2P98095 1184 aa11.83□□□□□ -0.52
LRRC49-207ENST00000558137 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
LRRC49-207ENST00000558137 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
LRRC49-207ENST00000558137 FKBP8Q14318 412 aa11.73□□□□□ -0.53
LRRC49-207ENST00000558137 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
LRRC49-207ENST00000558137 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
LRRC49-207ENST00000558137 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
LRRC49-207ENST00000558137 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
LRRC49-207ENST00000558137 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
LRRC49-207ENST00000558137 POTEHQ6S545 545 aa11.5□□□□□ -0.57
LRRC49-207ENST00000558137 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
LRRC49-207ENST00000558137 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
LRRC49-207ENST00000558137 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
LRRC49-207ENST00000558137 PROM2Q8N271 834 aa11.4□□□□□ -0.58
LRRC49-207ENST00000558137 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
LRRC49-207ENST00000558137 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
LRRC49-207ENST00000558137 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
LRRC49-207ENST00000558137 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
LRRC49-207ENST00000558137 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
LRRC49-207ENST00000558137 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
LRRC49-207ENST00000558137 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
LRRC49-207ENST00000558137 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
LRRC49-207ENST00000558137 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
LRRC49-207ENST00000558137 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
LRRC49-207ENST00000558137 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
LRRC49-207ENST00000558137 PLEKHG5O94827 1062 aa10.98□□□□□ -0.65
LRRC49-207ENST00000558137 MIER1Q8N108 512 aa10.98□□□□□ -0.65
LRRC49-207ENST00000558137 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
LRRC49-207ENST00000558137 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
LRRC49-207ENST00000558137 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
LRRC49-207ENST00000558137 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
LRRC49-207ENST00000558137 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
LRRC49-207ENST00000558137 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
LRRC49-207ENST00000558137 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
LRRC49-207ENST00000558137 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
LRRC49-207ENST00000558137 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
LRRC49-207ENST00000558137 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
LRRC49-207ENST00000558137 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
LRRC49-207ENST00000558137 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
LRRC49-207ENST00000558137 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
LRRC49-207ENST00000558137 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
LRRC49-207ENST00000558137 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
LRRC49-207ENST00000558137 NUBP1P53384 320 aa10.67□□□□□ -0.7
LRRC49-207ENST00000558137 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
LRRC49-207ENST00000558137 PKD2Q13563 968 aa10.63□□□□□ -0.71
LRRC49-207ENST00000558137 GSE1Q14687 1217 aa10.63□□□□□ -0.71
LRRC49-207ENST00000558137 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
LRRC49-207ENST00000558137 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
LRRC49-207ENST00000558137 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
LRRC49-207ENST00000558137 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
LRRC49-207ENST00000558137 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
LRRC49-207ENST00000558137 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms