RNA–Protein interactions for RNA: ENST00000558091.5

USP8-205, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-205ENST00000558091 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
USP8-205ENST00000558091 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
USP8-205ENST00000558091 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
USP8-205ENST00000558091 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
USP8-205ENST00000558091 FOXD1Q16676 465 aa17.77■□□□□ 0.44
USP8-205ENST00000558091 MSH5O43196 834 aa16.76■□□□□ 0.27
USP8-205ENST00000558091 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
USP8-205ENST00000558091 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
USP8-205ENST00000558091 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
USP8-205ENST00000558091 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
USP8-205ENST00000558091 ADRA2BP18089 450 aa16.38■□□□□ 0.21
USP8-205ENST00000558091 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
USP8-205ENST00000558091 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
USP8-205ENST00000558091 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
USP8-205ENST00000558091 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
USP8-205ENST00000558091 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
USP8-205ENST00000558091 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
USP8-205ENST00000558091 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
USP8-205ENST00000558091 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
USP8-205ENST00000558091 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
USP8-205ENST00000558091 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
USP8-205ENST00000558091 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
USP8-205ENST00000558091 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
USP8-205ENST00000558091 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
USP8-205ENST00000558091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.27e-7■□□□□ 11.3
USP8-205ENST00000558091 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
USP8-205ENST00000558091 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
USP8-205ENST00000558091 CAPN15O75808 1086 aa13.36□□□□□ -0.27
USP8-205ENST00000558091 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
USP8-205ENST00000558091 DSG3P32926 999 aa13.26□□□□□ -0.29
USP8-205ENST00000558091 KCNA4P22459 653 aa13.23□□□□□ -0.29
USP8-205ENST00000558091 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
USP8-205ENST00000558091 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
USP8-205ENST00000558091 APLP2Q06481 763 aa13.09□□□□□ -0.31
USP8-205ENST00000558091 POTEHQ6S545 545 aa13.09□□□□□ -0.31
USP8-205ENST00000558091 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
USP8-205ENST00000558091 ABCB7O75027 752 aa13.02□□□□□ -0.33
USP8-205ENST00000558091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
USP8-205ENST00000558091 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
USP8-205ENST00000558091 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
USP8-205ENST00000558091 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
USP8-205ENST00000558091 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
USP8-205ENST00000558091 POLA2Q14181 598 aa12.65□□□□□ -0.38
USP8-205ENST00000558091 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
USP8-205ENST00000558091 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
USP8-205ENST00000558091 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
USP8-205ENST00000558091 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
USP8-205ENST00000558091 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
USP8-205ENST00000558091 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
USP8-205ENST00000558091 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
USP8-205ENST00000558091 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
USP8-205ENST00000558091 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
USP8-205ENST00000558091 PIP4P2Q8N4L2 257 aa12.15□□□□□ -0.46
USP8-205ENST00000558091 ZBTB22O15209 634 aa12.12□□□□□ -0.47
USP8-205ENST00000558091 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
USP8-205ENST00000558091 HAX1O00165 279 aa12.05□□□□□ -0.48
USP8-205ENST00000558091 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
USP8-205ENST00000558091 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.495e-6■■■□□ 14.9
USP8-205ENST00000558091 FBLN2P98095 1184 aa12□□□□□ -0.49
USP8-205ENST00000558091 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
USP8-205ENST00000558091 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
USP8-205ENST00000558091 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
USP8-205ENST00000558091 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
USP8-205ENST00000558091 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
USP8-205ENST00000558091 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
USP8-205ENST00000558091 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
USP8-205ENST00000558091 EVX2Q03828 476 aa11.79□□□□□ -0.52
USP8-205ENST00000558091 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
USP8-205ENST00000558091 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
USP8-205ENST00000558091 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
USP8-205ENST00000558091 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
USP8-205ENST00000558091 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP8-205ENST00000558091 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
USP8-205ENST00000558091 GABBR2O75899 941 aa11.55□□□□□ -0.56
USP8-205ENST00000558091 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
USP8-205ENST00000558091 LHX8Q68G74 356 aa11.41□□□□□ -0.58
USP8-205ENST00000558091 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
USP8-205ENST00000558091 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
USP8-205ENST00000558091 CLCN6P51797 869 aa11.28□□□□□ -0.6
USP8-205ENST00000558091 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
USP8-205ENST00000558091 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
USP8-205ENST00000558091 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
USP8-205ENST00000558091 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
USP8-205ENST00000558091 CREBZFQ9NS37 354 aa11.21□□□□□ -0.61
USP8-205ENST00000558091 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
USP8-205ENST00000558091 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
USP8-205ENST00000558091 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
USP8-205ENST00000558091 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
USP8-205ENST00000558091 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
USP8-205ENST00000558091 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
USP8-205ENST00000558091 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
USP8-205ENST00000558091 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
USP8-205ENST00000558091 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
USP8-205ENST00000558091 OTUD5Q96G74 571 aa10.92□□□□□ -0.66
USP8-205ENST00000558091 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
USP8-205ENST00000558091 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
USP8-205ENST00000558091 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
USP8-205ENST00000558091 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
USP8-205ENST00000558091 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
USP8-205ENST00000558091 ASTLQ6HA08 431 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms