RNA–Protein interactions for RNA: ENST00000557977.5

LRRC49-205, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-205ENST00000557977 AEBP2Q6ZN18 517 aaPredicted RBP35.45■■■■□ 3.27
LRRC49-205ENST00000557977 CHIC1Q5VXU3 224 aa33.43■■■□□ 2.94
LRRC49-205ENST00000557977 SENP3Q9H4L4 574 aaPredicted RBP30.12■■■□□ 2.41
LRRC49-205ENST00000557977 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
LRRC49-205ENST00000557977 FOXD1Q16676 465 aa28.2■■■□□ 2.1
LRRC49-205ENST00000557977 PLPPR3Q6T4P5 718 aa26.59■■□□□ 1.85
LRRC49-205ENST00000557977 MSH5O43196 834 aa26.32■■□□□ 1.8
LRRC49-205ENST00000557977 PPP6R1Q9UPN7 881 aa26.31■■□□□ 1.8
LRRC49-205ENST00000557977 PIAS4Q8N2W9 510 aaPredicted RBP26.28■■□□□ 1.8
LRRC49-205ENST00000557977 ADRA2BP18089 450 aa26.2■■□□□ 1.78
LRRC49-205ENST00000557977 POTEDQ86YR6 584 aa26.05■■□□□ 1.76
LRRC49-205ENST00000557977 MAPK8IP2Q13387 824 aaPredicted RBP24.14■■□□□ 1.45
LRRC49-205ENST00000557977 DMRT2Q9Y5R5 561 aa23.89■■□□□ 1.41
LRRC49-205ENST00000557977 SCAF1Q9H7N4 1312 aaKnown RBP23.79■■□□□ 1.4
LRRC49-205ENST00000557977 PPP4R3CPQ6ZMV5 832 aa23.35■■□□□ 1.33
LRRC49-205ENST00000557977 DCAF8L1A6NGE4 600 aa22.98■■□□□ 1.27
LRRC49-205ENST00000557977 HOXD11P31277 338 aaPredicted RBP22.94■■□□□ 1.26
LRRC49-205ENST00000557977 CNKSR2Q8WXI2 1034 aa22.89■■□□□ 1.25
LRRC49-205ENST00000557977 CACNB1Q02641 598 aaPredicted RBP22.74■■□□□ 1.23
LRRC49-205ENST00000557977 RNF216Q9NWF9 866 aaPredicted RBP22.72■■□□□ 1.23
LRRC49-205ENST00000557977 RNF39Q9H2S5 420 aa22.5■■□□□ 1.19
LRRC49-205ENST00000557977 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
LRRC49-205ENST00000557977 NPM3O75607 178 aaKnown RBP22.11■■□□□ 1.13
LRRC49-205ENST00000557977 C1QBPQ07021 282 aaKnown RBP22.11■■□□□ 1.13
LRRC49-205ENST00000557977 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
LRRC49-205ENST00000557977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
LRRC49-205ENST00000557977 KCNA4P22459 653 aa21.6■■□□□ 1.05
LRRC49-205ENST00000557977 U3KPZ7 1027 aaPredicted RBP21.45■■□□□ 1.02
LRRC49-205ENST00000557977 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
LRRC49-205ENST00000557977 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
LRRC49-205ENST00000557977 CAPN15O75808 1086 aa21.14■□□□□ 0.97
LRRC49-205ENST00000557977 DSG3P32926 999 aa21.05■□□□□ 0.96
LRRC49-205ENST00000557977 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
LRRC49-205ENST00000557977 ABCB7O75027 752 aa20.7■□□□□ 0.9
LRRC49-205ENST00000557977 APLP2Q06481 763 aa20.64■□□□□ 0.89
LRRC49-205ENST00000557977 ZNF219Q9P2Y4 722 aaPredicted RBP20.64■□□□□ 0.89
LRRC49-205ENST00000557977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
LRRC49-205ENST00000557977 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
LRRC49-205ENST00000557977 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
LRRC49-205ENST00000557977 MYCNP04198 464 aaPredicted RBP20.38■□□□□ 0.85
LRRC49-205ENST00000557977 POTEHQ6S545 545 aa20.36■□□□□ 0.85
LRRC49-205ENST00000557977 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
LRRC49-205ENST00000557977 POLA2Q14181 598 aa20.18■□□□□ 0.82
LRRC49-205ENST00000557977 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
LRRC49-205ENST00000557977 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
LRRC49-205ENST00000557977 RBM42Q9BTD8 480 aaKnown RBP19.97■□□□□ 0.79
LRRC49-205ENST00000557977 ZBTB22O15209 634 aa19.89■□□□□ 0.77
LRRC49-205ENST00000557977 CHRDL2Q6WN34 429 aa19.68■□□□□ 0.74
LRRC49-205ENST00000557977 ZBTB12Q9Y330 459 aaPredicted RBP19.62■□□□□ 0.73
LRRC49-205ENST00000557977 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
LRRC49-205ENST00000557977 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
LRRC49-205ENST00000557977 ATXN8OSP0DMR3 200 aa19.43■□□□□ 0.7
LRRC49-205ENST00000557977 REM2Q8IYK8 340 aaPredicted RBP19.41■□□□□ 0.7
LRRC49-205ENST00000557977 PITPNM1O00562 1244 aa19.22■□□□□ 0.67
LRRC49-205ENST00000557977 PIP4P2Q8N4L2 257 aa19.21■□□□□ 0.67
LRRC49-205ENST00000557977 FBLN2P98095 1184 aa19.13■□□□□ 0.65
LRRC49-205ENST00000557977 MKRN4PQ13434 485 aaPredicted RBP19.11■□□□□ 0.65
LRRC49-205ENST00000557977 SPDYE2BA6NHP3 402 aa19.06■□□□□ 0.64
LRRC49-205ENST00000557977 SPDYE6P0CI01 402 aa19.06■□□□□ 0.64
LRRC49-205ENST00000557977 SPDYE2Q495Y8 402 aa19.06■□□□□ 0.64
LRRC49-205ENST00000557977 FXR2P51116 673 aaKnown RBP eCLIP19.05■□□□□ 0.64
LRRC49-205ENST00000557977 SP7Q8TDD2 431 aaPredicted RBP19■□□□□ 0.63
LRRC49-205ENST00000557977 HAX1O00165 279 aa18.89■□□□□ 0.61
LRRC49-205ENST00000557977 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
LRRC49-205ENST00000557977 CLEC11AQ9Y240 323 aa18.83■□□□□ 0.6
LRRC49-205ENST00000557977 SSUH2Q9Y2M2 353 aa18.83■□□□□ 0.6
LRRC49-205ENST00000557977 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
LRRC49-205ENST00000557977 SPDYE1Q8NFV5 336 aaPredicted RBP18.77■□□□□ 0.6
LRRC49-205ENST00000557977 EVX2Q03828 476 aa18.75■□□□□ 0.59
LRRC49-205ENST00000557977 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
LRRC49-205ENST00000557977 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
LRRC49-205ENST00000557977 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
LRRC49-205ENST00000557977 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
LRRC49-205ENST00000557977 C19orf67A6NJJ6 358 aa18.44■□□□□ 0.54
LRRC49-205ENST00000557977 PRR29P0C7W0 189 aa18.44■□□□□ 0.54
LRRC49-205ENST00000557977 GABBR2O75899 941 aa18.23■□□□□ 0.51
LRRC49-205ENST00000557977 FARP1Q9Y4F1 1045 aaPredicted RBP18.16■□□□□ 0.5
LRRC49-205ENST00000557977 CD44P16070 742 aaKnown RBP18.1■□□□□ 0.49
LRRC49-205ENST00000557977 SPDYE4A6NLX3 237 aa18.07■□□□□ 0.48
LRRC49-205ENST00000557977 CREBZFQ9NS37 354 aa18■□□□□ 0.47
LRRC49-205ENST00000557977 STAG3Q9UJ98 1225 aa17.94■□□□□ 0.46
LRRC49-205ENST00000557977 POTEIP0CG38 1075 aa17.9■□□□□ 0.46
LRRC49-205ENST00000557977 LHX8Q68G74 356 aa17.83■□□□□ 0.44
LRRC49-205ENST00000557977 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.44
LRRC49-205ENST00000557977 ZNF579Q8NAF0 562 aaKnown RBP17.78■□□□□ 0.44
LRRC49-205ENST00000557977 CLCN6P51797 869 aa17.71■□□□□ 0.43
LRRC49-205ENST00000557977 MNX1P50219 401 aaPredicted RBP17.68■□□□□ 0.42
LRRC49-205ENST00000557977 DCBLD2Q96PD2 775 aa17.67■□□□□ 0.42
LRRC49-205ENST00000557977 GALR2O43603 387 aaPredicted RBP17.66■□□□□ 0.42
LRRC49-205ENST00000557977 PHF12Q96QT6 1004 aa17.62■□□□□ 0.41
LRRC49-205ENST00000557977 PROM2Q8N271 834 aa17.59■□□□□ 0.41
LRRC49-205ENST00000557977 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
LRRC49-205ENST00000557977 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
LRRC49-205ENST00000557977 TSPYL2Q9H2G4 693 aaPredicted RBP17.36■□□□□ 0.37
LRRC49-205ENST00000557977 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
LRRC49-205ENST00000557977 MS4A3Q96HJ5 214 aa17.35■□□□□ 0.37
LRRC49-205ENST00000557977 POTEB2H3BUK9 544 aa17.33■□□□□ 0.36
LRRC49-205ENST00000557977 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
LRRC49-205ENST00000557977 MIER1Q8N108 512 aa17.25■□□□□ 0.35
LRRC49-205ENST00000557977 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms