RNA–Protein interactions for RNA: ENST00000557711.5

ACTR10-216, Transcript of actin related protein 10 homolog, humanhuman

TSL 1 (best)

Gene ACTR10, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-216ENST00000557711 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
ACTR10-216ENST00000557711 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
ACTR10-216ENST00000557711 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
ACTR10-216ENST00000557711 PHF23Q9BUL5 403 aaPredicted RBP21.27■□□□□ 0.99
ACTR10-216ENST00000557711 FOXD1Q16676 465 aa20.02■□□□□ 0.8
ACTR10-216ENST00000557711 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
ACTR10-216ENST00000557711 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
ACTR10-216ENST00000557711 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
ACTR10-216ENST00000557711 ADRA2BP18089 450 aa18.79■□□□□ 0.6
ACTR10-216ENST00000557711 PIAS4Q8N2W9 510 aaPredicted RBP18.79■□□□□ 0.6
ACTR10-216ENST00000557711 MSH5O43196 834 aa18.73■□□□□ 0.59
ACTR10-216ENST00000557711 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
ACTR10-216ENST00000557711 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
ACTR10-216ENST00000557711 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
ACTR10-216ENST00000557711 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
ACTR10-216ENST00000557711 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
ACTR10-216ENST00000557711 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
ACTR10-216ENST00000557711 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
ACTR10-216ENST00000557711 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
ACTR10-216ENST00000557711 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
ACTR10-216ENST00000557711 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
ACTR10-216ENST00000557711 KCNA4P22459 653 aa16.03■□□□□ 0.16
ACTR10-216ENST00000557711 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
ACTR10-216ENST00000557711 RNF39Q9H2S5 420 aa15.96■□□□□ 0.14
ACTR10-216ENST00000557711 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
ACTR10-216ENST00000557711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
ACTR10-216ENST00000557711 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
ACTR10-216ENST00000557711 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
ACTR10-216ENST00000557711 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
ACTR10-216ENST00000557711 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
ACTR10-216ENST00000557711 CAPN15O75808 1086 aa15.15■□□□□ 0.02
ACTR10-216ENST00000557711 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
ACTR10-216ENST00000557711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
ACTR10-216ENST00000557711 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
ACTR10-216ENST00000557711 APLP2Q06481 763 aa15.12■□□□□ 0.01
ACTR10-216ENST00000557711 SAMD1Q6SPF0 538 aaPredicted RBP15.04■□□□□ -0
ACTR10-216ENST00000557711 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
ACTR10-216ENST00000557711 DSG3P32926 999 aa15□□□□□ -0.01
ACTR10-216ENST00000557711 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
ACTR10-216ENST00000557711 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
ACTR10-216ENST00000557711 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
ACTR10-216ENST00000557711 ABCB7O75027 752 aa14.8□□□□□ -0.04
ACTR10-216ENST00000557711 ZBTB22O15209 634 aa14.72□□□□□ -0.05
ACTR10-216ENST00000557711 POTEHQ6S545 545 aa14.58□□□□□ -0.08
ACTR10-216ENST00000557711 POLA2Q14181 598 aa14.57□□□□□ -0.08
ACTR10-216ENST00000557711 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
ACTR10-216ENST00000557711 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
ACTR10-216ENST00000557711 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
ACTR10-216ENST00000557711 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
ACTR10-216ENST00000557711 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
ACTR10-216ENST00000557711 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
ACTR10-216ENST00000557711 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
ACTR10-216ENST00000557711 FBLN2P98095 1184 aa14.08□□□□□ -0.16
ACTR10-216ENST00000557711 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
ACTR10-216ENST00000557711 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
ACTR10-216ENST00000557711 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
ACTR10-216ENST00000557711 SPDYE2BA6NHP3 402 aa13.92□□□□□ -0.18
ACTR10-216ENST00000557711 SPDYE6P0CI01 402 aa13.92□□□□□ -0.18
ACTR10-216ENST00000557711 SPDYE2Q495Y8 402 aa13.92□□□□□ -0.18
ACTR10-216ENST00000557711 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
ACTR10-216ENST00000557711 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
ACTR10-216ENST00000557711 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
ACTR10-216ENST00000557711 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
ACTR10-216ENST00000557711 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
ACTR10-216ENST00000557711 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
ACTR10-216ENST00000557711 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
ACTR10-216ENST00000557711 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
ACTR10-216ENST00000557711 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
ACTR10-216ENST00000557711 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
ACTR10-216ENST00000557711 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
ACTR10-216ENST00000557711 PRR29P0C7W0 189 aa13.38□□□□□ -0.27
ACTR10-216ENST00000557711 HAX1O00165 279 aa13.34□□□□□ -0.27
ACTR10-216ENST00000557711 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
ACTR10-216ENST00000557711 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
ACTR10-216ENST00000557711 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
ACTR10-216ENST00000557711 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
ACTR10-216ENST00000557711 EVX2Q03828 476 aa13.13□□□□□ -0.31
ACTR10-216ENST00000557711 PROM2Q8N271 834 aa13.11□□□□□ -0.31
ACTR10-216ENST00000557711 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
ACTR10-216ENST00000557711 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
ACTR10-216ENST00000557711 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
ACTR10-216ENST00000557711 FKBP8Q14318 412 aa12.92□□□□□ -0.34
ACTR10-216ENST00000557711 GABBR2O75899 941 aa12.9□□□□□ -0.35
ACTR10-216ENST00000557711 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTR10-216ENST00000557711 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
ACTR10-216ENST00000557711 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
ACTR10-216ENST00000557711 CLCN6P51797 869 aa12.83□□□□□ -0.36
ACTR10-216ENST00000557711 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
ACTR10-216ENST00000557711 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
ACTR10-216ENST00000557711 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
ACTR10-216ENST00000557711 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
ACTR10-216ENST00000557711 MIER1Q8N108 512 aa12.76□□□□□ -0.37
ACTR10-216ENST00000557711 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
ACTR10-216ENST00000557711 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
ACTR10-216ENST00000557711 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
ACTR10-216ENST00000557711 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
ACTR10-216ENST00000557711 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
ACTR10-216ENST00000557711 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
ACTR10-216ENST00000557711 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
ACTR10-216ENST00000557711 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms