RNA–Protein interactions for RNA: ENST00000557638.1

RALGAPA1-218, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 2

Gene RALGAPA1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-218ENST00000557638 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
RALGAPA1-218ENST00000557638 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
RALGAPA1-218ENST00000557638 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
RALGAPA1-218ENST00000557638 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
RALGAPA1-218ENST00000557638 FOXD1Q16676 465 aa21.9■■□□□ 1.1
RALGAPA1-218ENST00000557638 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
RALGAPA1-218ENST00000557638 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
RALGAPA1-218ENST00000557638 ADRA2BP18089 450 aa20.79■□□□□ 0.92
RALGAPA1-218ENST00000557638 POTEDQ86YR6 584 aa20.73■□□□□ 0.91
RALGAPA1-218ENST00000557638 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
RALGAPA1-218ENST00000557638 MSH5O43196 834 aa20.42■□□□□ 0.86
RALGAPA1-218ENST00000557638 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
RALGAPA1-218ENST00000557638 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
RALGAPA1-218ENST00000557638 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
RALGAPA1-218ENST00000557638 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
RALGAPA1-218ENST00000557638 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
RALGAPA1-218ENST00000557638 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
RALGAPA1-218ENST00000557638 KCNA4P22459 653 aa18.29■□□□□ 0.52
RALGAPA1-218ENST00000557638 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
RALGAPA1-218ENST00000557638 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
RALGAPA1-218ENST00000557638 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
RALGAPA1-218ENST00000557638 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
RALGAPA1-218ENST00000557638 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
RALGAPA1-218ENST00000557638 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
RALGAPA1-218ENST00000557638 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
RALGAPA1-218ENST00000557638 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
RALGAPA1-218ENST00000557638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.373e-6■□□□□ 9.5
RALGAPA1-218ENST00000557638 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
RALGAPA1-218ENST00000557638 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
RALGAPA1-218ENST00000557638 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
RALGAPA1-218ENST00000557638 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
RALGAPA1-218ENST00000557638 ZBTB22O15209 634 aa16.84■□□□□ 0.29
RALGAPA1-218ENST00000557638 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
RALGAPA1-218ENST00000557638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
RALGAPA1-218ENST00000557638 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
RALGAPA1-218ENST00000557638 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
RALGAPA1-218ENST00000557638 APLP2Q06481 763 aa16.67■□□□□ 0.26
RALGAPA1-218ENST00000557638 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
RALGAPA1-218ENST00000557638 CAPN15O75808 1086 aa16.59■□□□□ 0.25
RALGAPA1-218ENST00000557638 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
RALGAPA1-218ENST00000557638 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
RALGAPA1-218ENST00000557638 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
RALGAPA1-218ENST00000557638 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
RALGAPA1-218ENST00000557638 DSG3P32926 999 aa16.42■□□□□ 0.22
RALGAPA1-218ENST00000557638 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
RALGAPA1-218ENST00000557638 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
RALGAPA1-218ENST00000557638 ABCB7O75027 752 aa16.26■□□□□ 0.19
RALGAPA1-218ENST00000557638 POTEHQ6S545 545 aa16.16■□□□□ 0.18
RALGAPA1-218ENST00000557638 POLA2Q14181 598 aa16.15■□□□□ 0.18
RALGAPA1-218ENST00000557638 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
RALGAPA1-218ENST00000557638 FBLN2P98095 1184 aa15.7■□□□□ 0.1
RALGAPA1-218ENST00000557638 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
RALGAPA1-218ENST00000557638 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
RALGAPA1-218ENST00000557638 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
RALGAPA1-218ENST00000557638 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
RALGAPA1-218ENST00000557638 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
RALGAPA1-218ENST00000557638 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
RALGAPA1-218ENST00000557638 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
RALGAPA1-218ENST00000557638 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
RALGAPA1-218ENST00000557638 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
RALGAPA1-218ENST00000557638 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
RALGAPA1-218ENST00000557638 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
RALGAPA1-218ENST00000557638 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
RALGAPA1-218ENST00000557638 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
RALGAPA1-218ENST00000557638 PITPNM1O00562 1244 aa15.07■□□□□ 0
RALGAPA1-218ENST00000557638 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
RALGAPA1-218ENST00000557638 PROM2Q8N271 834 aa14.96□□□□□ -0.01
RALGAPA1-218ENST00000557638 FKBP8Q14318 412 aa14.93□□□□□ -0.02
RALGAPA1-218ENST00000557638 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
RALGAPA1-218ENST00000557638 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
RALGAPA1-218ENST00000557638 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
RALGAPA1-218ENST00000557638 FXR2P51116 673 aaKnown RBP eCLIP14.87□□□□□ -0.03
RALGAPA1-218ENST00000557638 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
RALGAPA1-218ENST00000557638 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
RALGAPA1-218ENST00000557638 HAX1O00165 279 aa14.68□□□□□ -0.06
RALGAPA1-218ENST00000557638 PRKAR2AP13861 404 aaKnown RBP14.68□□□□□ -0.06
RALGAPA1-218ENST00000557638 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
RALGAPA1-218ENST00000557638 CREBZFQ9NS37 354 aa14.57□□□□□ -0.08
RALGAPA1-218ENST00000557638 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
RALGAPA1-218ENST00000557638 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
RALGAPA1-218ENST00000557638 EVX2Q03828 476 aa14.44□□□□□ -0.1
RALGAPA1-218ENST00000557638 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
RALGAPA1-218ENST00000557638 MIER1Q8N108 512 aa14.4□□□□□ -0.1
RALGAPA1-218ENST00000557638 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
RALGAPA1-218ENST00000557638 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
RALGAPA1-218ENST00000557638 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
RALGAPA1-218ENST00000557638 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
RALGAPA1-218ENST00000557638 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
RALGAPA1-218ENST00000557638 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
RALGAPA1-218ENST00000557638 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
RALGAPA1-218ENST00000557638 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
RALGAPA1-218ENST00000557638 ZRANB1Q9UGI0 708 aa14.11□□□□□ -0.15
RALGAPA1-218ENST00000557638 NUBP1P53384 320 aa14.1□□□□□ -0.15
RALGAPA1-218ENST00000557638 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
RALGAPA1-218ENST00000557638 GABBR2O75899 941 aa14.09□□□□□ -0.15
RALGAPA1-218ENST00000557638 ZNF579Q8NAF0 562 aaKnown RBP14.08□□□□□ -0.16
RALGAPA1-218ENST00000557638 RASEFQ8IZ41 740 aa14.07□□□□□ -0.16
RALGAPA1-218ENST00000557638 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
RALGAPA1-218ENST00000557638 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
RALGAPA1-218ENST00000557638 CLCN6P51797 869 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms