RNA–Protein interactions for RNA: ENST00000557069.1

RALGAPA1-216, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 2

Gene RALGAPA1, Length 467 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-216ENST00000557069 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
RALGAPA1-216ENST00000557069 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
RALGAPA1-216ENST00000557069 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
RALGAPA1-216ENST00000557069 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
RALGAPA1-216ENST00000557069 FOXD1Q16676 465 aa18.37■□□□□ 0.53
RALGAPA1-216ENST00000557069 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
RALGAPA1-216ENST00000557069 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
RALGAPA1-216ENST00000557069 ADRA2BP18089 450 aa17.29■□□□□ 0.36
RALGAPA1-216ENST00000557069 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
RALGAPA1-216ENST00000557069 MSH5O43196 834 aa17.14■□□□□ 0.33
RALGAPA1-216ENST00000557069 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
RALGAPA1-216ENST00000557069 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
RALGAPA1-216ENST00000557069 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
RALGAPA1-216ENST00000557069 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
RALGAPA1-216ENST00000557069 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
RALGAPA1-216ENST00000557069 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
RALGAPA1-216ENST00000557069 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
RALGAPA1-216ENST00000557069 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
RALGAPA1-216ENST00000557069 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
RALGAPA1-216ENST00000557069 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
RALGAPA1-216ENST00000557069 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
RALGAPA1-216ENST00000557069 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
RALGAPA1-216ENST00000557069 KCNA4P22459 653 aa14.67□□□□□ -0.06
RALGAPA1-216ENST00000557069 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
RALGAPA1-216ENST00000557069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.099e-8■□□□□ 10.2
RALGAPA1-216ENST00000557069 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
RALGAPA1-216ENST00000557069 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
RALGAPA1-216ENST00000557069 U3KPZ7 1027 aaPredicted RBP14.14□□□□□ -0.15
RALGAPA1-216ENST00000557069 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
RALGAPA1-216ENST00000557069 CAPN15O75808 1086 aa13.96□□□□□ -0.17
RALGAPA1-216ENST00000557069 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
RALGAPA1-216ENST00000557069 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
RALGAPA1-216ENST00000557069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
RALGAPA1-216ENST00000557069 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
RALGAPA1-216ENST00000557069 APLP2Q06481 763 aa13.8□□□□□ -0.2
RALGAPA1-216ENST00000557069 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
RALGAPA1-216ENST00000557069 DSG3P32926 999 aa13.76□□□□□ -0.21
RALGAPA1-216ENST00000557069 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
RALGAPA1-216ENST00000557069 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
RALGAPA1-216ENST00000557069 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
RALGAPA1-216ENST00000557069 ABCB7O75027 752 aa13.63□□□□□ -0.23
RALGAPA1-216ENST00000557069 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
RALGAPA1-216ENST00000557069 ZBTB22O15209 634 aa13.45□□□□□ -0.26
RALGAPA1-216ENST00000557069 POLA2Q14181 598 aa13.41□□□□□ -0.26
RALGAPA1-216ENST00000557069 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
RALGAPA1-216ENST00000557069 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
RALGAPA1-216ENST00000557069 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
RALGAPA1-216ENST00000557069 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
RALGAPA1-216ENST00000557069 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
RALGAPA1-216ENST00000557069 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
RALGAPA1-216ENST00000557069 POTEHQ6S545 545 aa12.97□□□□□ -0.33
RALGAPA1-216ENST00000557069 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
RALGAPA1-216ENST00000557069 FBLN2P98095 1184 aa12.89□□□□□ -0.35
RALGAPA1-216ENST00000557069 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
RALGAPA1-216ENST00000557069 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
RALGAPA1-216ENST00000557069 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
RALGAPA1-216ENST00000557069 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
RALGAPA1-216ENST00000557069 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
RALGAPA1-216ENST00000557069 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
RALGAPA1-216ENST00000557069 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
RALGAPA1-216ENST00000557069 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
RALGAPA1-216ENST00000557069 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
RALGAPA1-216ENST00000557069 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
RALGAPA1-216ENST00000557069 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
RALGAPA1-216ENST00000557069 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
RALGAPA1-216ENST00000557069 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
RALGAPA1-216ENST00000557069 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
RALGAPA1-216ENST00000557069 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
RALGAPA1-216ENST00000557069 HAX1O00165 279 aa12.33□□□□□ -0.44
RALGAPA1-216ENST00000557069 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
RALGAPA1-216ENST00000557069 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
RALGAPA1-216ENST00000557069 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
RALGAPA1-216ENST00000557069 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
RALGAPA1-216ENST00000557069 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
RALGAPA1-216ENST00000557069 EVX2Q03828 476 aa12.12□□□□□ -0.47
RALGAPA1-216ENST00000557069 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
RALGAPA1-216ENST00000557069 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
RALGAPA1-216ENST00000557069 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
RALGAPA1-216ENST00000557069 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
RALGAPA1-216ENST00000557069 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
RALGAPA1-216ENST00000557069 GABBR2O75899 941 aa11.87□□□□□ -0.51
RALGAPA1-216ENST00000557069 PROM2Q8N271 834 aa11.87□□□□□ -0.51
RALGAPA1-216ENST00000557069 FKBP8Q14318 412 aa11.83□□□□□ -0.52
RALGAPA1-216ENST00000557069 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
RALGAPA1-216ENST00000557069 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
RALGAPA1-216ENST00000557069 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
RALGAPA1-216ENST00000557069 MIER1Q8N108 512 aa11.75□□□□□ -0.53
RALGAPA1-216ENST00000557069 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
RALGAPA1-216ENST00000557069 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
RALGAPA1-216ENST00000557069 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
RALGAPA1-216ENST00000557069 CLCN6P51797 869 aa11.69□□□□□ -0.54
RALGAPA1-216ENST00000557069 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
RALGAPA1-216ENST00000557069 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
RALGAPA1-216ENST00000557069 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
RALGAPA1-216ENST00000557069 TSPYL2Q9H2G4 693 aaPredicted RBP11.63□□□□□ -0.55
RALGAPA1-216ENST00000557069 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
RALGAPA1-216ENST00000557069 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
RALGAPA1-216ENST00000557069 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
RALGAPA1-216ENST00000557069 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
RALGAPA1-216ENST00000557069 LHX8Q68G74 356 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms