RNA–Protein interactions for RNA: ENST00000557063.5

KLHDC2-210, Transcript of kelch domain containing 2, humanhuman

TSL 2

Gene KLHDC2, Length 827 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-210ENST00000557063 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
KLHDC2-210ENST00000557063 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
KLHDC2-210ENST00000557063 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
KLHDC2-210ENST00000557063 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
KLHDC2-210ENST00000557063 FOXD1Q16676 465 aa18.93■□□□□ 0.62
KLHDC2-210ENST00000557063 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
KLHDC2-210ENST00000557063 MSH5O43196 834 aa17.77■□□□□ 0.44
KLHDC2-210ENST00000557063 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
KLHDC2-210ENST00000557063 PIAS4Q8N2W9 510 aaPredicted RBP17.74■□□□□ 0.43
KLHDC2-210ENST00000557063 ADRA2BP18089 450 aa17.71■□□□□ 0.43
KLHDC2-210ENST00000557063 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
KLHDC2-210ENST00000557063 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
KLHDC2-210ENST00000557063 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
KLHDC2-210ENST00000557063 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
KLHDC2-210ENST00000557063 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
KLHDC2-210ENST00000557063 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
KLHDC2-210ENST00000557063 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
KLHDC2-210ENST00000557063 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
KLHDC2-210ENST00000557063 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
KLHDC2-210ENST00000557063 DCAF8L1A6NGE4 600 aa15.47■□□□□ 0.07
KLHDC2-210ENST00000557063 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
KLHDC2-210ENST00000557063 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
KLHDC2-210ENST00000557063 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
KLHDC2-210ENST00000557063 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
KLHDC2-210ENST00000557063 KCNA4P22459 653 aa14.99□□□□□ -0.01
KLHDC2-210ENST00000557063 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
KLHDC2-210ENST00000557063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.026e-8■■□□□ 12.8
KLHDC2-210ENST00000557063 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
KLHDC2-210ENST00000557063 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
KLHDC2-210ENST00000557063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
KLHDC2-210ENST00000557063 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
KLHDC2-210ENST00000557063 APLP2Q06481 763 aa14.32□□□□□ -0.12
KLHDC2-210ENST00000557063 CAPN15O75808 1086 aa14.3□□□□□ -0.12
KLHDC2-210ENST00000557063 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
KLHDC2-210ENST00000557063 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
KLHDC2-210ENST00000557063 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
KLHDC2-210ENST00000557063 DSG3P32926 999 aa14.19□□□□□ -0.14
KLHDC2-210ENST00000557063 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
KLHDC2-210ENST00000557063 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
KLHDC2-210ENST00000557063 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
KLHDC2-210ENST00000557063 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
KLHDC2-210ENST00000557063 ABCB7O75027 752 aa13.92□□□□□ -0.18
KLHDC2-210ENST00000557063 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
KLHDC2-210ENST00000557063 POLA2Q14181 598 aa13.75□□□□□ -0.21
KLHDC2-210ENST00000557063 ZBTB22O15209 634 aa13.74□□□□□ -0.21
KLHDC2-210ENST00000557063 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
KLHDC2-210ENST00000557063 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
KLHDC2-210ENST00000557063 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
KLHDC2-210ENST00000557063 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
KLHDC2-210ENST00000557063 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
KLHDC2-210ENST00000557063 POTEHQ6S545 545 aa13.41□□□□□ -0.26
KLHDC2-210ENST00000557063 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
KLHDC2-210ENST00000557063 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
KLHDC2-210ENST00000557063 FBLN2P98095 1184 aa13.26□□□□□ -0.29
KLHDC2-210ENST00000557063 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
KLHDC2-210ENST00000557063 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
KLHDC2-210ENST00000557063 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
KLHDC2-210ENST00000557063 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
KLHDC2-210ENST00000557063 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
KLHDC2-210ENST00000557063 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
KLHDC2-210ENST00000557063 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
KLHDC2-210ENST00000557063 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
KLHDC2-210ENST00000557063 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
KLHDC2-210ENST00000557063 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
KLHDC2-210ENST00000557063 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.35
KLHDC2-210ENST00000557063 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
KLHDC2-210ENST00000557063 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
KLHDC2-210ENST00000557063 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
KLHDC2-210ENST00000557063 HAX1O00165 279 aa12.65□□□□□ -0.38
KLHDC2-210ENST00000557063 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
KLHDC2-210ENST00000557063 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
KLHDC2-210ENST00000557063 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
KLHDC2-210ENST00000557063 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
KLHDC2-210ENST00000557063 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
KLHDC2-210ENST00000557063 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
KLHDC2-210ENST00000557063 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
KLHDC2-210ENST00000557063 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
KLHDC2-210ENST00000557063 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
KLHDC2-210ENST00000557063 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
KLHDC2-210ENST00000557063 EVX2Q03828 476 aa12.42□□□□□ -0.42
KLHDC2-210ENST00000557063 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
KLHDC2-210ENST00000557063 PROM2Q8N271 834 aa12.3□□□□□ -0.44
KLHDC2-210ENST00000557063 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
KLHDC2-210ENST00000557063 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
KLHDC2-210ENST00000557063 CLCN6P51797 869 aa12.23□□□□□ -0.45
KLHDC2-210ENST00000557063 GABBR2O75899 941 aa12.22□□□□□ -0.45
KLHDC2-210ENST00000557063 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
KLHDC2-210ENST00000557063 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
KLHDC2-210ENST00000557063 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
KLHDC2-210ENST00000557063 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
KLHDC2-210ENST00000557063 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
KLHDC2-210ENST00000557063 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
KLHDC2-210ENST00000557063 FKBP8Q14318 412 aa12.04□□□□□ -0.48
KLHDC2-210ENST00000557063 MIER1Q8N108 512 aa11.99□□□□□ -0.49
KLHDC2-210ENST00000557063 DCBLD2Q96PD2 775 aa11.95□□□□□ -0.5
KLHDC2-210ENST00000557063 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
KLHDC2-210ENST00000557063 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
KLHDC2-210ENST00000557063 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
KLHDC2-210ENST00000557063 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
KLHDC2-210ENST00000557063 GALR2O43603 387 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 295 ms