RNA–Protein interactions for RNA: ENST00000557050.1

LINC02290-204, Transcript of long intergenic non-protein coding RNA 2290, humanhuman

TSL 4

Gene LINC02290, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02290-204ENST00000557050 AEBP2Q6ZN18 517 aaPredicted RBP38.82■■■■□ 3.8
LINC02290-204ENST00000557050 CHIC1Q5VXU3 224 aa36.57■■■■□ 3.44
LINC02290-204ENST00000557050 SENP3Q9H4L4 574 aaPredicted RBP33.04■■■□□ 2.88
LINC02290-204ENST00000557050 PHF23Q9BUL5 403 aaPredicted RBP32.63■■■□□ 2.81
LINC02290-204ENST00000557050 FOXD1Q16676 465 aa30.91■■■□□ 2.54
LINC02290-204ENST00000557050 PLPPR3Q6T4P5 718 aa29.08■■■□□ 2.25
LINC02290-204ENST00000557050 MSH5O43196 834 aa28.91■■■□□ 2.22
LINC02290-204ENST00000557050 PIAS4Q8N2W9 510 aaPredicted RBP28.81■■■□□ 2.2
LINC02290-204ENST00000557050 PPP6R1Q9UPN7 881 aa28.75■■■□□ 2.19
LINC02290-204ENST00000557050 POTEDQ86YR6 584 aa28.7■■■□□ 2.18
LINC02290-204ENST00000557050 ADRA2BP18089 450 aa28.65■■■□□ 2.18
LINC02290-204ENST00000557050 MAPK8IP2Q13387 824 aaPredicted RBP26.4■■□□□ 1.82
LINC02290-204ENST00000557050 DMRT2Q9Y5R5 561 aa26.19■■□□□ 1.78
LINC02290-204ENST00000557050 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
LINC02290-204ENST00000557050 PPP4R3CPQ6ZMV5 832 aa25.5■■□□□ 1.67
LINC02290-204ENST00000557050 DCAF8L1A6NGE4 600 aa25.2■■□□□ 1.62
LINC02290-204ENST00000557050 HOXD11P31277 338 aaPredicted RBP25.11■■□□□ 1.61
LINC02290-204ENST00000557050 CNKSR2Q8WXI2 1034 aa25.03■■□□□ 1.6
LINC02290-204ENST00000557050 CACNB1Q02641 598 aaPredicted RBP25.01■■□□□ 1.59
LINC02290-204ENST00000557050 RNF216Q9NWF9 866 aaPredicted RBP24.86■■□□□ 1.57
LINC02290-204ENST00000557050 RNF39Q9H2S5 420 aa24.7■■□□□ 1.54
LINC02290-204ENST00000557050 NCBP3Q53F19 620 aaKnown RBP24.37■■□□□ 1.49
LINC02290-204ENST00000557050 C1QBPQ07021 282 aaKnown RBP24.27■■□□□ 1.48
LINC02290-204ENST00000557050 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
LINC02290-204ENST00000557050 NPM3O75607 178 aaKnown RBP24.12■■□□□ 1.45
LINC02290-204ENST00000557050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.43
LINC02290-204ENST00000557050 KCNA4P22459 653 aa23.49■■□□□ 1.35
LINC02290-204ENST00000557050 U3KPZ7 1027 aaPredicted RBP23.46■■□□□ 1.35
LINC02290-204ENST00000557050 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
LINC02290-204ENST00000557050 CAPN15O75808 1086 aa23.17■■□□□ 1.3
LINC02290-204ENST00000557050 SLC4A2P04920 1241 aa23.11■■□□□ 1.29
LINC02290-204ENST00000557050 DSG3P32926 999 aa23.07■■□□□ 1.28
LINC02290-204ENST00000557050 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
LINC02290-204ENST00000557050 ABCB7O75027 752 aa22.65■■□□□ 1.22
LINC02290-204ENST00000557050 APLP2Q06481 763 aa22.64■■□□□ 1.21
LINC02290-204ENST00000557050 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
LINC02290-204ENST00000557050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
LINC02290-204ENST00000557050 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
LINC02290-204ENST00000557050 SAMD1Q6SPF0 538 aaPredicted RBP22.49■■□□□ 1.19
LINC02290-204ENST00000557050 POTEHQ6S545 545 aa22.43■■□□□ 1.18
LINC02290-204ENST00000557050 MYCNP04198 464 aaPredicted RBP22.26■■□□□ 1.15
LINC02290-204ENST00000557050 SLC4A1APQ9BWU0 796 aaKnown RBP22.09■■□□□ 1.13
LINC02290-204ENST00000557050 POLA2Q14181 598 aa22.07■■□□□ 1.12
LINC02290-204ENST00000557050 RBM42Q9BTD8 480 aaKnown RBP21.94■■□□□ 1.1
LINC02290-204ENST00000557050 FOXD4L1Q9NU39 408 aa21.93■■□□□ 1.1
LINC02290-204ENST00000557050 ATF5Q9Y2D1 282 aaPredicted RBP21.88■■□□□ 1.09
LINC02290-204ENST00000557050 ZBTB22O15209 634 aa21.62■■□□□ 1.05
LINC02290-204ENST00000557050 CHRDL2Q6WN34 429 aa21.62■■□□□ 1.05
LINC02290-204ENST00000557050 ZBTB12Q9Y330 459 aaPredicted RBP21.5■■□□□ 1.03
LINC02290-204ENST00000557050 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
LINC02290-204ENST00000557050 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
LINC02290-204ENST00000557050 REM2Q8IYK8 340 aaPredicted RBP21.26■□□□□ 0.99
LINC02290-204ENST00000557050 ATXN8OSP0DMR3 200 aa21.2■□□□□ 0.98
LINC02290-204ENST00000557050 PIP4P2Q8N4L2 257 aa21.07■□□□□ 0.96
LINC02290-204ENST00000557050 PITPNM1O00562 1244 aa21.06■□□□□ 0.96
LINC02290-204ENST00000557050 FBLN2P98095 1184 aa20.92■□□□□ 0.94
LINC02290-204ENST00000557050 SP7Q8TDD2 431 aaPredicted RBP20.91■□□□□ 0.94
LINC02290-204ENST00000557050 FXR2P51116 673 aaKnown RBP eCLIP20.88■□□□□ 0.93
LINC02290-204ENST00000557050 SPDYE2BA6NHP3 402 aa20.86■□□□□ 0.93
LINC02290-204ENST00000557050 SPDYE6P0CI01 402 aa20.86■□□□□ 0.93
LINC02290-204ENST00000557050 SPDYE2Q495Y8 402 aa20.86■□□□□ 0.93
LINC02290-204ENST00000557050 MKRN4PQ13434 485 aaPredicted RBP20.84■□□□□ 0.93
LINC02290-204ENST00000557050 HAX1O00165 279 aa20.75■□□□□ 0.91
LINC02290-204ENST00000557050 ZNF692Q9BU19 519 aaPredicted RBP20.61■□□□□ 0.89
LINC02290-204ENST00000557050 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
LINC02290-204ENST00000557050 SSUH2Q9Y2M2 353 aa20.59■□□□□ 0.89
LINC02290-204ENST00000557050 SPDYE1Q8NFV5 336 aaPredicted RBP20.55■□□□□ 0.88
LINC02290-204ENST00000557050 EVX2Q03828 476 aa20.54■□□□□ 0.88
LINC02290-204ENST00000557050 PRKAR2AP13861 404 aaKnown RBP20.51■□□□□ 0.87
LINC02290-204ENST00000557050 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
LINC02290-204ENST00000557050 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.85
LINC02290-204ENST00000557050 CHADLQ6NUI6 762 aa20.28■□□□□ 0.84
LINC02290-204ENST00000557050 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
LINC02290-204ENST00000557050 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
LINC02290-204ENST00000557050 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
LINC02290-204ENST00000557050 GABBR2O75899 941 aa20■□□□□ 0.79
LINC02290-204ENST00000557050 FARP1Q9Y4F1 1045 aaPredicted RBP19.88■□□□□ 0.77
LINC02290-204ENST00000557050 CD44P16070 742 aaKnown RBP19.84■□□□□ 0.77
LINC02290-204ENST00000557050 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
LINC02290-204ENST00000557050 CREBZFQ9NS37 354 aa19.67■□□□□ 0.74
LINC02290-204ENST00000557050 POTEIP0CG38 1075 aa19.62■□□□□ 0.73
LINC02290-204ENST00000557050 LHX8Q68G74 356 aa19.61■□□□□ 0.73
LINC02290-204ENST00000557050 STAG3Q9UJ98 1225 aa19.61■□□□□ 0.73
LINC02290-204ENST00000557050 ZRANB1Q9UGI0 708 aa19.52■□□□□ 0.72
LINC02290-204ENST00000557050 ZNF579Q8NAF0 562 aaKnown RBP19.49■□□□□ 0.71
LINC02290-204ENST00000557050 CLCN6P51797 869 aa19.45■□□□□ 0.7
LINC02290-204ENST00000557050 DCBLD2Q96PD2 775 aa19.39■□□□□ 0.69
LINC02290-204ENST00000557050 GALR2O43603 387 aaPredicted RBP19.34■□□□□ 0.69
LINC02290-204ENST00000557050 MNX1P50219 401 aaPredicted RBP19.3■□□□□ 0.68
LINC02290-204ENST00000557050 PHF12Q96QT6 1004 aa19.28■□□□□ 0.68
LINC02290-204ENST00000557050 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
LINC02290-204ENST00000557050 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
LINC02290-204ENST00000557050 PROM2Q8N271 834 aa19.15■□□□□ 0.66
LINC02290-204ENST00000557050 POTEB2H3BUK9 544 aa18.99■□□□□ 0.63
LINC02290-204ENST00000557050 PELP1Q8IZL8 1130 aaKnown RBP18.99■□□□□ 0.63
LINC02290-204ENST00000557050 MS4A3Q96HJ5 214 aa18.99■□□□□ 0.63
LINC02290-204ENST00000557050 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
LINC02290-204ENST00000557050 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
LINC02290-204ENST00000557050 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
LINC02290-204ENST00000557050 ASTLQ6HA08 431 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms